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Matrix information:
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ADAN-name: 1GBR2.PDB
Scoring matrix: 1GBR2_mat
Uniprot code: Q60631
Genome source: Mus musculus
Wild-type ligand: LLPKLPPK
Foldx wt ligand score: 5.52
Foldx random average score for Mus musculus: 5.793 Available information for Q60631 in MINT (Nov 2008):
Nš of interacting proteins: 32
Proteins belonging to other specie: 6
Nš of interactions described: 55
Interactions with other species: 12
Genome scanning information:
Subcellular location: True
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 13502
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 30944
Total fragments: 13452797
Proteins after random average filtering: 30942
Total fragments: 6973386
Proteins after disorder filtering: 23012
Total fragments: 672355
Proteins after pattern filtering: 14332
Total fragments: 75819
Proteins after MINT filtering: 12
Total fragments: 88
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
LLPKLPPK |
5.52
|
-3.75 |
0.00 |
| Best peptides |
FMGVDMRH |
0.00
|
3.40 |
7.15 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q62245 |
LKSPGVRP |
3.30
|
-1.67 |
2.08 |
|
YSYPLKSP |
4.33
|
-1.43 |
2.32 |
|
GVRPSNPR |
5.12
|
0.97 |
4.72 |
| P04925 |
WNKPSKPK |
5.21
|
0.13 |
3.88 |
| Q923U0 |
DLSPIVPV |
4.67
|
-3.19 |
0.56 |
|
QISPNRPT |
5.00
|
-1.46 |
2.29 |
|
PSAPSCDL |
5.16
|
1.15 |
4.90 |
| Q02384 |
LKSPGIRP |
3.27
|
-1.67 |
2.08 |
|
SEEPLIPP |
4.15
|
-1.63 |
2.12 |
|
DPLPDTPP |
4.41
|
-0.29 |
3.46 |
| Q91ZZ2 |
ASKPDGQP |
3.19
|
1.00 |
4.75 |
|
PPLPGIRV |
3.78
|
-0.90 |
2.85 |
|
PSSPASKP |
4.12
|
0.34 |
4.09 |
| Q60992 |
RGDPDSPW |
2.86
|
-0.47 |
3.28 |
|
HGNPAPPG |
4.22
|
0.41 |
4.16 |
|
PAPPGKPV |
4.33
|
0.15 |
3.90 |
| O35716 |
PAVPAPAP |
4.51
|
0.49 |
4.24 |
|
SSSPAAPV |
4.62
|
1.15 |
4.90 |
|
RPCPAVPA |
5.69
|
0.87 |
4.62 |
| Q80U87 |
EMAPSSAP |
2.78
|
-1.90 |
1.85 |
|
LPTQMPPP |
5.29
|
-1.69 |
2.06 |
|
PPEMAPSS |
5.57
|
-0.03 |
3.72 |
| Q9EQ32 |
ASAPGPPP |
3.57
|
0.79 |
4.54 |
|
NLPPEISP |
5.34
|
-2.58 |
1.17 |
|
PPPPDNEP |
5.61
|
0.20 |
3.95 |
| Q9Z1S8 |
PMNPGSST |
0.80
|
-1.85 |
1.90 |
|
PMSPGPHH |
1.28
|
-2.03 |
1.72 |
|
DFQPGSPS |
3.35
|
-0.26 |
3.49 |
| Q62077 |
DGPDGMPV |
3.89
|
0.16 |
3.91 |
|
GPDGMPVI |
5.35
|
-1.72 |
2.03 |
|
WDGPDGMP |
5.57
|
0.86 |
4.61 |
| Q9QYY0 |
PMTPGTFD |
1.58
|
-1.78 |
1.97 |
|
PMNPNLSG |
3.28
|
-2.02 |
1.73 |
|
PMNPNSPP |
3.31
|
-2.47 |
1.28 |
|
