|
Matrix information:
(Help)
ADAN-name: 1FU52.PDB
Scoring matrix: 1FU52_mat
Uniprot code: Q63787
Genome source: Rattus norvegicus
Wild-type ligand: EEEyMPMEDLyLDIL
Foldx wt ligand score: 59.45
Foldx random average score for Rattus norvegicus: 41.063 Available information for Q63787 in MINT (Nov 2008):
Nš of interacting proteins: 9
Proteins belonging to other specie: 0
Nš of interactions described: 13
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Rattus norvegicus: 15006
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 3052
Total scanned proteins: 11953
Total fragments: 5484524
Proteins after random average filtering: 11946
Total fragments: 2827013
Proteins after disorder filtering: 7897
Total fragments: 177528
Proteins after pattern filtering: 4150
Total fragments: 33449
Proteins after MINT filtering: 3
Total fragments: 111
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
EEEyMPMEDLyLDIL |
59.45
|
38.59 |
0.00 |
| Best peptides |
PGKGsMGGGLTyGKK |
0.00
|
45.75 |
7.16 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P35570 |
TSSDSLGGGYCGARP |
18.36
|
13.81 |
-24.78 |
|
PPGGGSGGRLPGYRH |
19.79
|
15.57 |
-23.02 |
|
SLGGGYCGARPESSV |
20.80
|
14.03 |
-24.56 |
| O08724 |
KGLGRAPGLSSGSYR |
23.05
|
21.88 |
-16.71 |
|
GSAPSYRGPDLGGDY |
28.87
|
23.02 |
-15.57 |
|
EVPGAAPGNSPHSYA |
32.63
|
21.40 |
-17.19 |
| P62813 |
PTATSYTPNLARGDP |
36.22
|
18.08 |
-20.51 |
|
YAPTATSYTPNLARG |
40.95
|
19.06 |
-19.53 |
|
