ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SHO1_2VKN-8.PDB
Scoring matrix: SHO1_2VKN-8_mat
Uniprot code: P40073
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.57
Foldx random average score for Saccharomyces cerevisiae: 12.335

Available information for P40073 in MINT (Nov 2008):
Nš of interacting proteins: 56
 Proteins belonging to other specie: 0
Nš of interactions described: 68
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1914250
Proteins after disorder filtering: 4820
 Total fragments: 135974
Proteins after pattern filtering: 2325
 Total fragments: 19727
Proteins after MINT filtering: 37
 Total fragments: 577

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

14.57

-2.72

0.00

Best peptides

HWPFRPEM

0.00

-7.19

-4.47

         
Interactors      
P11710

KPLPLTPN

8.08

-7.25

-4.53

LPLTPNSK

10.11

-4.88

-2.16

Q06604

EKPLLPTR

5.42

-9.77

-7.05

SPPPLPTR

5.83

-9.91

-7.19

KGPRMPSR

6.95

-7.89

-5.17

P24814

LHPPDIHP

8.66

-5.80

-3.08

IHPNLGPQ

9.61

-5.77

-3.05

HPNLGPQL

9.70

-5.82

-3.10

P40073

GYPQQQPS

8.25

-5.69

-2.97

YPQQQPSH

9.56

-6.48

-3.76

PQQQPSHT

10.02

-3.65

-0.93

P24583

APLPPQPR

8.23

-5.19

-2.47

ANAPLPPQ

8.58

-7.05

-4.33

NAPLPPQP

9.31

-6.48

-3.76

Q06412

RRPPPPPP

5.27

-8.57

-5.85

ERRPPPPP

5.54

-7.81

-5.09

FFTKPPPP

6.34

-7.71

-4.99

P40036

KSLPTTPG

10.27

-4.08

-1.36

SKSLPTTP

10.30

-4.81

-2.09

LPPLSPKS

10.46

-6.05

-3.33

P18494

VVPILPKP

7.05

-8.81

-6.09

PILPKPSP

8.34

-8.11

-5.39

RSVVPILP

8.78

-4.13

-1.41

P40055

IPDVKPDV

8.13

-6.75

-4.03

PDVKPDVK

9.75

-2.50

0.22

SDIPDVKP

10.88

-6.03

-3.31

P09620

NPISKPSI

7.52

-8.11

-5.39

DPSNIPQM

8.34

-6.78

-4.06

PSNIPQMH

9.94

-1.67

1.05

P13186

NNIPLTPL

7.63

-6.57

-3.85

SYVPNRVP

8.05

-5.86

-3.14

PEREPPTY

8.28

-6.48

-3.76

P04051

PHFPKNSK

8.59

-5.81

-3.09

NPAMLPGS

9.67

-6.98

-4.26

SVNPAMLP

11.63

-4.26

-1.54

P32334

DFSSPSSP

9.59

-4.38

-1.66

SSPSSPTT

11.08

-4.34

-1.62

SPSSPTTT

11.79

-2.72

-0.00

P39083

QSPATPSN

9.10

-5.58

-2.86

LQSPATPS

10.50

-3.36

-0.64

SPATPSNV

11.99

-2.71

0.01

P38753

TPVMPPQR

7.30

-7.14

-4.42

ISPPVPGP

8.27

-7.17

-4.45

NTPVMPPQ

8.55

-7.21

-4.49

Q06524

KYNPTVPN

5.29

-7.08

-4.36

PTVPNELL

9.19

-4.70

-1.98

WKYNPTVP

9.95

-4.70

-1.98

P40020

LYLTPESP

6.47

-6.41

-3.69

SRVLPPLP

6.59

-6.70

-3.98

PPPLTPEK

6.78

-8.33

-5.61

Q00246

PRLPTPFA

7.06

-7.33

-4.61

LPRLPTPF

7.20

-5.37

-2.65

SSNLPESP

9.07

-4.21

-1.49

P32448

DSPQLPSK

6.61

-8.45

-5.73

PRVPTDSP

6.65

-7.44

-4.72

PQLPSKDK

9.24

-4.30

-1.58

Q08229

DYNPTIPP

5.01

-7.44

-4.72

YNPTIPPR

7.04

-8.25

-5.53

TRPLPSTP

8.44

-5.03

-2.31

Q04439

SSKPKEPM

6.02

-5.70

-2.98

SKPKEPMF

6.70

-6.82

-4.10

PAPPPPGM

6.96

-7.90

-5.18

P35197

STPAKPPQ

7.69

-6.76

-4.04

RPDHLPPS

8.82

-7.68

-4.96

PAKPPQER

9.03

-3.84

-1.12

Q12446

PFPFPVPQ

5.10

-7.78

-5.06

PVPPPPPM

5.85

-7.94

-5.22

PFPFPIPE

5.90

-5.30

-2.58

P08018

QHPTRPNV

6.36

-8.40

-5.68

PRLPSDKF

6.82

-5.11

-2.39

PRRPLSTQ

7.14

-6.75

-4.03

P53552

LRPTGPDR

6.96

-8.65

-5.93

TQALPQGP

9.71

-3.00

-0.28

PQGPKGGN

10.15

-3.98

-1.26

P39969

AQPPKSPL

6.03

-6.77

-4.05

RRAPKPPS

6.71

-7.47

-4.75

VSPRRAPK

6.91

-7.20

-4.48

P46674

TSPPLPSH

6.79

-7.67

-4.95

INPVTPVL

8.87

-6.36

-3.64

PINPVTPV

9.38

-5.31

-2.59

P14906

KYGHPDGP

7.77

-3.43

-0.71

GHPDGPQS

10.81

-6.23

-3.51

HPDGPQST

11.54

-4.12

-1.40

Q03790

GFPSAPQP

7.56

-8.07

-5.35

PSAPQPLF

9.07

-5.50

-2.78

KPTATPSP

9.39

-7.16

-4.44

P40568

PYPGSPMH

6.98

-6.78

-4.06

PTPAMIPY

7.61

-6.39

-3.67

YYHPMNAP

8.33

-4.23

-1.51

Q12443

DPITVPAP

8.69

-7.41

-4.69

IPDPITVP

9.66

-6.88

-4.16

PDPITVPA

10.30

-6.89

-4.17

P41809

TYPTTPYP

5.70

-8.35

-5.63

PYPSPNSY

6.56

-6.54

-3.82

STYPTTPY

9.18

-5.42

-2.70

Q05080

QKPDKPRP

6.30

-9.94

-7.22

LRQKPDKP

7.13

-4.17

-1.45

RQKPDKPR

7.94

-5.57

-2.85

P25344

PGPSPNEA

10.89

-2.55

0.17

NTPGPSPN

11.28

-3.06

-0.34

ANTPGPSP

11.29

-4.22

-1.50

P07248

NSPISPHK

8.66

-5.52

-2.80

LSNSPISP

8.93

-3.88

-1.16

SNSPISPH

11.12

-3.53

-0.81

P53297

GYPGGIPF

5.57

-7.52

-4.80

PFQPQPMF

5.63

-7.38

-4.66

YHPSMPQM

6.57

-9.17

-6.45

P22147

SFPPPPPM

3.54

-9.31

-6.59

PYNIPPGF

3.95

-7.90

-5.18

LNIPTPPH

8.12

-5.56

-2.84

 


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