ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SHO1_2VKN-11.PDB
Scoring matrix: SHO1_2VKN-11_mat
Uniprot code: P40073
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 17.15
Foldx random average score for Saccharomyces cerevisiae: 14.372

Available information for P40073 in MINT (Nov 2008):
Nš of interacting proteins: 56
 Proteins belonging to other specie: 0
Nš of interactions described: 68
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1342553
Proteins after disorder filtering: 4750
 Total fragments: 84806
Proteins after pattern filtering: 2262
 Total fragments: 13639
Proteins after MINT filtering: 36
 Total fragments: 399

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

17.15

-1.87

0.00

Best peptides

WKPRFPR

0.00

-7.63

-5.76

         
Interactors      
P11710

KPLPLTP

11.70

-8.28

-6.41

PLTPNSK

12.54

-5.40

-3.53

LPLTPNS

13.62

-6.33

-4.46

Q06604

LPTRPNK

5.52

-9.23

-7.36

GPRMPSR

6.80

-7.98

-6.11

KPLLPTR

6.97

-9.56

-7.69

P24814

PDIHPNL

11.85

-5.92

-4.05

HPPDIHP

12.38

-5.85

-3.98

IHPNLGP

12.70

-5.67

-3.80

P40073

YPQQQPS

14.29

-5.63

-3.76

P24583

LPPQPRK

8.29

-8.16

-6.29

PLPPQPR

9.70

-7.82

-5.95

NAPLPPQ

12.99

-7.12

-5.25

Q06412

NSPKSPR

7.40

-3.85

-1.98

RPPPPPP

9.67

-11.22

-9.35

FSPNSPK

10.08

-4.23

-2.36

P40036

LPPLSPK

10.98

-5.68

-3.81

PTTPGIR

11.73

-4.96

-3.09

LPTTPGI

12.76

-6.16

-4.29

P18494

ILPKPSP

9.46

-6.14

-4.27

VVPILPK

10.49

-7.05

-5.18

NTPVDSP

12.15

-5.27

-3.40

P40055

PDVKPDV

10.47

-6.46

-4.59

IPDVKPD

13.53

-4.99

-3.12

P09620

PISKPSI

10.35

-6.17

-4.30

DPSNIPQ

12.58

-5.61

-3.74

PDPSNIP

14.25

-4.44

-2.57

P13186

PSYVPNR

6.91

-7.89

-6.02

LPEREPP

8.78

-8.40

-6.53

IPAALPP

11.66

-8.10

-6.23

P04051

SLPHFPK

9.15

-6.51

-4.64

NPAMLPG

11.90

-7.00

-5.13

LPHFPKN

12.54

-7.06

-5.19

P32334

SPSSPTT

13.56

-5.03

-3.16

FSSPSSP

13.56

-3.69

-1.82

P39083

SPATPSN

12.32

-5.42

-3.55

QSPATPS

14.09

-2.40

-0.53

P38753

PVMPPQR

9.49

-8.15

-6.28

SPPVPGP

10.45

-6.95

-5.08

YPSNLPI

10.86

-8.14

-6.27

Q06524

YNPTVPN

12.53

-6.01

-4.14

NPTVPNE

12.82

-4.85

-2.98

P40020

PESPLNR

8.18

-9.00

-7.13

EPTSPTR

8.19

-7.97

-6.10

PPLTPEK

9.89

-7.48

-5.61

Q00246

NLPRLPT

9.23

-7.76

-5.89

LPESPGT

12.36

-7.03

-5.16

LPRLPTP

12.84

-8.11

-6.24

P32448

SPQLPSK

10.33

-6.54

-4.67

RVPTDSP

12.55

-6.38

-4.51

Q08229

NPTIPPR

8.36

-10.56

-8.69

YNPTIPP

11.74

-6.84

-4.97

TPVQPGG

13.06

-5.98

-4.11

Q04439

PPSSKPK

9.87

-6.64

-4.77

KPAPPPP

10.01

-10.45

-8.58

PTPPQNR

10.02

-6.09

-4.22

P35197

TPAKPPQ

8.83

-7.87

-6.00

RPDHLPP

11.32

-9.95

-8.08

PDHLPPS

13.71

-7.07

-5.20

Q12446

APPPPPR

5.93

-10.57

-8.70

PPPPPRR

6.14

-9.63

-7.76

PPPPPHR

6.22

-11.58

-9.71

P08018

PPPRLPS

8.23

-9.26

-7.39

HPTRPNV

8.58

-8.47

-6.60

APRRPLS

8.79

-7.94

-6.07

P53552

LPTRPSK

5.25

-9.31

-7.44

RPTGPDR

7.54

-9.12

-7.25

ALPQGPK

12.15

-4.74

-2.87

P39969

SPRRAPK

6.72

-6.76

-4.89

PIPSPTR

8.00

-7.39

-5.52

SPAQPPK

8.79

-7.17

-5.30

P46674

RPNHFPF

11.27

-9.55

-7.68

INPVTPV

12.47

-3.54

-1.67

NPVTPVL

12.55

-5.37

-3.50

Q03790

FPSAPQP

11.32

-8.19

-6.32

TPSPFRP

11.66

-7.48

-5.61

PTATPSP

12.97

-4.96

-3.09

P40568

YPGSPMH

11.32

-7.14

-5.27

TPAMIPY

11.76

-6.02

-4.15

YHPMNAP

13.16

-5.80

-3.93

Q12443

PITVPAP

12.55

-7.12

-5.25

PDPITVP

13.84

-4.86

-2.99

P41809

YPTTPYP

11.34

-7.40

-5.53

SPSVPVA

12.09

-6.40

-4.53

TTPYPSP

12.27

-4.72

-2.85

Q05080

QKPDKPR

8.21

-6.97

-5.10

KPDKPRP

9.06

-9.36

-7.49

PDKPRPI

13.88

-5.54

-3.67

P25344

NTPGPSP

13.56

-3.81

-1.94

TPGPSPN

14.00

-3.84

-1.97

P07248

SPISPHK

10.00

-5.50

-3.63

PISPHKL

13.91

-3.31

-1.44

SNSPISP

14.16

-4.55

-2.68

P53297

PPKPISK

9.06

-8.14

-6.27

PEGKPPQ

9.93

-6.96

-5.09

LPPKPIS

10.17

-7.72

-5.85

P22147

FPPPPPM

8.63

-9.62

-7.75

TPPHPMN

11.11

-7.34

-5.47

HPLHPHQ

11.23

-5.94

-4.07

 


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