ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SHO1_1QKX-21.PDB
Scoring matrix: SHO1_1QKX-21_mat
Uniprot code: P40073
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 18.83
Foldx random average score for Saccharomyces cerevisiae: 17.908

Available information for P40073 in MINT (Nov 2008):
Nš of interacting proteins: 56
 Proteins belonging to other specie: 0
Nš of interactions described: 68
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1869407
Proteins after disorder filtering: 4445
 Total fragments: 83624
Proteins after pattern filtering: 1686
 Total fragments: 4318
Proteins after MINT filtering: 34
 Total fragments: 136

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

18.83

2.19

0.00

Best peptides

RWWMGIPRRR

0.00

7.91

5.72

         
Interactors      
P11710

KPLPLTPNSK

14.60

-1.89

-4.08

PLPLTPNSKY

17.82

-1.59

-3.78

Q06604

PLLPTRPNKA

12.73

0.33

-1.86

EKGPRMPSRG

13.16

-3.06

-5.25

RVKPAPPVSR

14.20

-3.62

-5.81

P24814

IHPNLGPQLW

14.68

-0.22

-2.41

HPNLGPQLWL

15.62

-2.95

-5.14

HPPDIHPNLG

15.75

-1.40

-3.59

P40073

GYPQQQPSHT

15.68

-0.60

-2.79

P24583

APLPPQPRKH

15.73

-3.85

-6.04

PPQPRKHDKT

17.32

-1.69

-3.88

PLPPQPRKHD

17.63

-1.58

-3.77

Q06412

PNSPKSPRDS

14.11

0.39

-1.80

PPPPLSTSRN

15.78

-2.05

-4.24

SPMVSPSSQS

16.30

-1.58

-3.77

P40036

ELPPLSPKST

14.11

-1.24

-3.43

KSLPTTPGIR

16.60

-2.54

-4.73

SLPTTPGIRS

16.97

-2.29

-4.48

P18494

NTPVDSPSVS

15.88

-0.77

-2.96

QNTPSAPATA

16.24

0.71

-1.48

TPVDSPSVSR

17.61

-2.94

-5.13

P40055

IPDVKPDVKG

16.15

-2.51

-4.70

P09620

PDPSNIPQMH

13.64

-4.51

-6.70

SNPISKPSIH

16.97

-1.71

-3.90

P13186

PLTPLATNTH

12.40

-2.44

-4.63

PMSPNYGNQS

12.44

0.25

-1.94

SSIPMSPNYG

15.21

-1.89

-4.08

P04051

RSLPHFPKNS

10.09

-1.27

-3.46

NPAMLPGSSN

17.22

-2.58

-4.77

P32334

FSSPSSPTTT

13.69

1.50

-0.69

P39083

PATPSNVSMY

16.75

-1.41

-3.60

QSPATPSNVS

17.48

1.85

-0.34

P38753

NLPIQHPTNS

11.77

-2.60

-4.79

LPIQHPTNSA

15.03

1.79

-0.40

NTPVMPPQRQ

15.77

-2.93

-5.12

Q06524

KYNPTVPNEL

14.99

2.33

0.14

P40020

YLTPESPLNR

10.84

-4.70

-6.89

SEEPTSPTRQ

11.22

-3.98

-6.17

MSLPVTPVKS

14.65

-0.60

-2.79

Q00246

SNLPESPGTL

17.47

0.72

-1.47

P32448

PQLPSKDKSQ

15.12

-0.48

-2.67

TDSPQLPSKD

17.48

0.45

-1.74

Q08229

RPLPSTPNED

15.77

0.32

-1.87

LPTPVQPGGH

16.32

-2.65

-4.84

PSTPNEDSRV

16.92

-1.58

-3.77

Q04439

NNIPTPPQNR

13.30

-2.29

-4.48

PPPPGMQNKA

14.24

-0.47

-2.66

SSKPKEPMFE

15.34

-1.28

-3.47

P35197

RPDHLPPSQG

16.96

-1.81

-4.00

STPAKPPQER

17.34

-1.62

-3.81

Q12446

RPLPQLPNRN

9.86

-4.27

-6.46

PLPQLPNRNN

14.95

-2.44

-4.63

ALPPASPEVR

15.27

-1.09

-3.28

P08018

TQHPTRPNVA

14.96

0.30

-1.89

PPRLPSDKFS

16.06

-1.92

-4.11

P53552

PTRPSKSKTY

14.16

0.25

-1.94

QALPQGPKGG

14.42

-0.97

-3.16

ALRPTGPDRG

15.44

-0.37

-2.56

P39969

PKSPLLNNTR

11.70

-3.18

-5.37

SPIPSPTRNS

13.85

-0.99

-3.18

AQPPKSPLLN

14.97

-3.02

-5.21

P46674

PINPVTPVLD

15.32

-1.70

-3.89

P14906

YGHPDGPQST

17.13

0.68

-1.51

GHPDGPQSTS

17.24

0.08

-2.11

PDGPQSTSHG

17.70

-0.13

-2.32

P40568

IPYPGSPMHS

13.40

-1.03

-3.22

Q12443

PITVPAPTRH

13.17

-4.10

-6.29

P41809

PQTPLRSLAG

17.26

-1.60

-3.79

P07248

SNSPISPHKL

15.56

-1.00

-3.19

NSPISPHKLI

15.70

-3.74

-5.93

P53297

GFPMGGPSAS

13.00

-3.01

-5.20

FYHPSMPQMM

13.23

-2.24

-4.43

SMPQMMPVMG

13.62

-2.72

-4.91

P22147

PHQMPYPNMN

12.91

-4.04

-6.23

EIPKGEPFDS

14.84

0.62

-1.57

GLHPLHPHQM

16.21

-1.60

-3.79

 


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