ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SHO1_1QKX-19.PDB
Scoring matrix: SHO1_1QKX-19_mat
Uniprot code: P40073
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 19.4
Foldx random average score for Saccharomyces cerevisiae: 22.314

Available information for P40073 in MINT (Nov 2008):
Nš of interacting proteins: 56
 Proteins belonging to other specie: 0
Nš of interactions described: 68
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1557023
Proteins after disorder filtering: 4567
 Total fragments: 88191
Proteins after pattern filtering: 1894
 Total fragments: 6192
Proteins after MINT filtering: 33
 Total fragments: 175

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

19.40

4.62

0.00

Best peptides

RDRRIGRGR

0.00

4.01

-0.61

         
Interactors      
P11710

PLTPNSKYN

18.35

-0.09

-4.71

KPLPLTPNS

22.04

-0.62

-5.24

Q06604

GPRMPSRGR

13.52

-3.88

-8.50

PLLPTRPNK

16.52

-4.12

-8.74

EEKPLLPTR

16.63

-4.76

-9.38

P24814

NSTRPQMPS

17.35

-1.20

-5.82

PDIHPNLGP

21.45

-0.60

-5.22

IHPNLGPQL

21.56

-2.58

-7.20

P24583

APLPPQPRK

19.61

-1.87

-6.49

RANAPLPPQ

19.87

-4.10

-8.72

PPQPRKHDK

21.73

0.66

-3.96

Q06412

PKLPPLNTR

16.51

-1.18

-5.80

PKSPRDSSK

17.85

-1.60

-6.22

NGFSPNSPK

17.86

-1.27

-5.89

P40036

IELPPLSPK

16.15

-3.85

-8.47

ELPPLSPKS

20.86

-0.69

-5.31

PTTPGIRSG

21.03

-1.32

-5.94

P18494

ILPKPSPNS

16.52

-2.33

-6.95

RSVVPILPK

17.80

-1.63

-6.25

PVDSPSVSR

21.04

-2.72

-7.34

P40055

PDVKPDVKG

14.15

-2.52

-7.14

SDIPDVKPD

21.49

-0.38

-5.00

P09620

PSNIPQMHA

18.70

-1.76

-6.38

PDPSNIPQM

19.20

-0.89

-5.51

LSNPISKPS

20.39

-1.45

-6.07

P13186

PMSPNYGNQ

18.25

-2.00

-6.62

KAPSYVPNR

18.76

-3.13

-7.75

NSSIPMSPN

19.19

-1.39

-6.01

P04051

VNPAMLPGS

17.61

0.04

-4.58

RSLPHFPKN

18.98

-1.62

-6.24

LPHFPKNSK

19.81

-1.41

-6.03

P39083

PATPSNVSM

19.21

-1.98

-6.60

P38753

PVMPPQRQS

18.31

-2.70

-7.32

PIQHPTNSA

19.04

-3.48

-8.10

NNTPVMPPQ

19.25

-1.91

-6.53

Q06524

WKYNPTVPN

21.11

-0.39

-5.01

KYNPTVPNE

21.89

-1.25

-5.87

P40020

MSLPVTPVK

18.80

-1.94

-6.56

VNPHSIPFS

19.54

1.33

-3.29

SEEPTSPTR

20.83

-0.42

-5.04

Q00246

SNLPESPGT

21.46

-0.24

-4.86

P32448

TDSPQLPSK

18.56

-2.73

-7.35

PRVPTDSPQ

20.29

-1.81

-6.43

PQLPSKDKS

21.38

0.95

-3.67

Q08229

PVQPGGHYK

15.91

-2.03

-6.65

PSTPNEDSR

20.15

-2.32

-6.94

LPTPVQPGG

21.37

-0.24

-4.86

Q04439

PSSKPKEPM

15.40

-2.43

-7.05

NNNIPTPPQ

18.19

-1.10

-5.72

PKEPMFEAA

18.85

-2.09

-6.71

P35197

PAKPPQERS

20.62

-1.74

-6.36

GSTPAKPPQ

21.93

-0.06

-4.68

Q12446

PQLPNRNNR

15.00

-2.23

-6.85

RPLPQLPNR

18.15

-2.27

-6.89

PASPEVRKE

19.20

-2.33

-6.95

P08018

PRLPSDKFS

16.81

-1.25

-5.87

PRRPLSTQH

18.21

0.69

-3.93

TRPNVAPHK

18.48

-2.26

-6.88

P53552

LPTRPSKSK

14.84

-3.48

-8.10

ALRPTGPDR

17.53

0.26

-4.36

QALPQGPKG

18.28

-0.10

-4.72

P39969

KLLPPQPGS

16.50

-2.55

-7.17

LPPQPGSKK

18.08

-1.42

-6.04

LSPIPSPTR

19.22

-1.28

-5.90

P46674

PVTPVLDGA

19.29

-1.33

-5.95

TRPNHFPFS

21.51

1.32

-3.30

STSPPLPSH

22.25

0.77

-3.85

P14906

YGHPDGPQS

17.65

-2.27

-6.89

KYGHPDGPQ

18.16

-1.55

-6.17

PDGPQSTSH

21.49

1.10

-3.52

Q03790

PTATPSPFR

19.26

-2.00

-6.62

LNGFPSAPQ

21.79

-1.54

-6.16

P40568

PAMIPYPGS

16.77

-0.07

-4.69

PGSPMHSIM

17.34

-3.40

-8.02

MIPYPGSPM

17.71

-1.90

-6.52

Q12443

PITVPAPTR

19.13

-0.43

-5.05

P22147

NGLHPLHPH

16.08

0.87

-3.75

PHQMPYPNM

16.55

-3.25

-7.87

NLNIPTPPH

18.03

0.83

-3.79

Q05080

LRQKPDKPR

10.28

-6.19

-10.81

P07248

SNSPISPHK

17.36

-4.11

-8.73

P53297

PGGIPFQGM

13.48

-3.03

-7.65

PGMNPAMGM

14.93

-3.25

-7.87

FYHPSMPQM

17.39

-3.13

-7.75

 


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