ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SDC25_1OV32-8.PDB
Scoring matrix: SDC25_1OV32-8_mat
Uniprot code: P14771
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 13.06
Foldx random average score for Saccharomyces cerevisiae: 10.336

Available information for P14771 in MINT (Nov 2008):
Nš of interacting proteins: 2
 Proteins belonging to other specie: 0
Nš of interactions described: 2
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1480956
Proteins after disorder filtering: 4503
 Total fragments: 76746
Proteins after pattern filtering: 2227
 Total fragments: 14616
Proteins after MINT filtering: 2
 Total fragments: 54


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

13.06

-2.43

0.00

Best peptides

EMRPEIEF

0.00

-3.77

-1.34

         
Interactors      
P40450

APPPLPDL

4.18

-8.77

-6.34

PPPPLPES

4.45

-7.19

-4.76

KLPQLPPP

5.74

-8.03

-5.60

Q08601

YNRPVYPP

5.40

-5.61

-3.18

YQRPMAPP

6.17

-7.02

-4.59

NRPVYPPP

7.16

-5.98

-3.55

 


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