ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SDC25_1OV32-28.PDB
Scoring matrix: SDC25_1OV32-28_mat
Uniprot code: P14771
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 21.61
Foldx random average score for Saccharomyces cerevisiae: 19.227

Available information for P14771 in MINT (Nov 2008):
Nš of interacting proteins: 2
 Proteins belonging to other specie: 0
Nš of interactions described: 2
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1692871
Proteins after disorder filtering: 4525
 Total fragments: 87257
Proteins after pattern filtering: 2161
 Total fragments: 12142
Proteins after MINT filtering: 2
 Total fragments: 25


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

21.61

1.00

0.00

Best peptides

RRDIHEDERE

0.00

-5.30

-6.30

         
Interactors      
P40450

PPPPPPLPQS

13.50

-6.25

-7.25

APPPLPDLFK

13.55

-4.44

-5.44

PKLFPRLSSD

13.73

-5.32

-6.32

Q08601

RPMAPPPNQQ

13.28

-4.94

-5.94

QRPMAPPPNQ

13.64

-5.25

-6.25

PPGPPPMAYN

15.49

-5.92

-6.92

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER