ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: PIN3_1YNZ-8.PDB
Scoring matrix: PIN3_1YNZ-8_mat
Uniprot code: Q06449
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 13.26
Foldx random average score for Saccharomyces cerevisiae: 10.707

Available information for Q06449 in MINT (Nov 2008):
Nš of interacting proteins: 38
 Proteins belonging to other specie: 0
Nš of interactions described: 44
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1670896
Proteins after disorder filtering: 4704
 Total fragments: 111638
Proteins after pattern filtering: 2271
 Total fragments: 15390
Proteins after MINT filtering: 25
 Total fragments: 444


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

13.26

3.54

0.00

Best peptides

HRPPMGKW

0.00

-2.70

-6.24

         
Interactors      
Q06604

SPPPLPTR

6.62

-6.60

-10.14

KGPRMPSR

6.73

-5.71

-9.25

LLPTRPNK

6.80

-4.40

-7.94

P24583

PLPPQPRK

7.25

-5.65

-9.19

ANAPLPPQ

7.78

-3.16

-6.70

APLPPQPR

8.33

-2.42

-5.96

P38260

GGPDDPTL

8.44

-3.34

-6.88

Q04322

TPPTLPPR

6.51

-6.45

-9.99

APLDRPQL

7.18

-4.51

-8.05

TSPPLPPR

7.26

-5.46

-9.00

Q12168

IPPPVPNR

5.79

-5.72

-9.26

GPPPLPPR

5.88

-6.55

-10.09

HPVPKPNI

6.31

-4.84

-8.38

P15891

AQPPLPSR

6.60

-6.91

-10.45

EDEPEGEP

6.82

-3.07

-6.61

APPPPPRR

6.88

-5.51

-9.05

Q12344

SSPPLPPR

7.24

-5.75

-9.29

TSPKLPPR

7.57

-5.50

-9.04

PLPPRQNV

7.95

-3.22

-6.76

P39521

DAQPKPKP

7.85

-4.02

-7.56

QPKPKPAQ

8.15

-3.36

-6.90

HVPDRPPS

8.25

-4.83

-8.37

P40325

PRPPRPAA

5.85

-4.20

-7.74

SQPPRPPR

6.01

-6.21

-9.75

RPPPRPQQ

6.94

-5.73

-9.27

Q08601

NRPVYPPP

6.84

-3.94

-7.48

YNRPVYPP

7.11

-1.14

-4.68

QRPMAPPP

7.15

-3.65

-7.19

P19812

RPRRIPPT

7.70

-4.47

-8.01

SPIFRPGN

8.03

-3.88

-7.42

EPRPRRIP

8.18

-2.80

-6.34

Q12412

PPQPPPAY

7.17

-3.45

-6.99

YDPNHRPP

8.43

-1.86

-5.40

QPPPAYDP

8.82

-2.86

-6.40

Q08412

VPPQLPTR

7.31

-6.15

-9.69

ELPTQPVR

7.66

-5.77

-9.31

DVPPQLPT

8.18

-4.61

-8.15

P53118

ENPHDLPS

7.46

-2.69

-6.23

NPHDLPSH

9.14

-3.48

-7.02

VENPHDLP

9.35

0.35

-3.19

P38216

SRPSNPPP

6.17

-4.83

-8.37

YSRPSNPP

9.67

-0.92

-4.46

P53933

APPPLPNR

5.31

-6.77

-10.31

RRPPPPPI

5.92

-4.07

-7.61

RRRPPPPP

6.32

-4.15

-7.69

Q12446

APPPPPAF

6.03

-5.11

-8.65

APPPPPHR

6.60

-5.12

-8.66

PPPRRGPA

6.66

-4.65

-8.19

P38266

QPPPKPFR

6.13

-5.87

-9.41

MPPPKPFR

6.14

-6.14

-9.68

LPPPKPFR

6.17

-6.42

-9.96

P40483

SKPSVPPR

7.02

-6.64

-10.18

PSVPPRNY

8.19

-1.51

-5.05

APASKPSV

9.27

-2.50

-6.04

P07244

EMPGMYPP

7.71

-4.71

-8.25

SEMPGMYP

9.60

-1.15

-4.69

P40563

APPPVPKK

6.02

-5.01

-8.55

VNPGQLPP

6.94

-3.78

-7.32

VTPKVPER

8.30

-4.69

-8.23

Q07533

KSDPHFPY

6.13

-0.37

-3.91

MNNPLPPL

6.36

-3.27

-6.81

PHFPYGTW

6.52

-2.68

-6.22

P53901

AMRPIPPL

6.16

-3.94

-7.48

PLPPIPTR

7.05

-3.88

-7.42

MRPIPPLP

7.19

-3.65

-7.19

P37254

VGPGPGNP

8.66

-2.42

-5.96

PGPGNPNN

9.36

-2.76

-6.30

Q12489

SRPSAPPP

7.09

-3.74

-7.28

PSAPPPGY

9.38

-1.71

-5.25

 


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