ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: PIN3_1YNZ-20.PDB
Scoring matrix: PIN3_1YNZ-20_mat
Uniprot code: Q06449
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.56
Foldx random average score for Saccharomyces cerevisiae: 15.556

Available information for Q06449 in MINT (Nov 2008):
Nš of interacting proteins: 38
 Proteins belonging to other specie: 0
Nš of interactions described: 44
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1516936
Proteins after disorder filtering: 4538
 Total fragments: 76285
Proteins after pattern filtering: 2036
 Total fragments: 7596
Proteins after MINT filtering: 22
 Total fragments: 187


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.56

-1.91

0.00

Best peptides

RRPRRGFNF

0.00

-4.00

-2.09

         
Interactors      
Q06604

PLLPTRPNK

11.48

-6.61

-4.70

GPRMPSRGR

11.54

-4.25

-2.34

PPSPPAKRI

11.92

-9.29

-7.38

P40325

RPPRPAANL

6.10

-9.28

-7.37

HQSRPHQRP

11.39

-4.99

-3.08

PPPRPQQNP

11.68

-4.61

-2.70

Q04322

NDQAPLDRP

14.41

-5.29

-3.38

Q12168

PPLPPRANV

10.77

-7.50

-5.59

QHPVPKPNI

10.97

-4.41

-2.50

NDDPYFPQF

11.18

-5.71

-3.80

P15891

QPPLPSRNV

11.86

-7.17

-5.26

RRATPEKKP

12.11

-4.05

-2.14

PPPPPRRAT

12.72

-4.88

-2.97

Q12344

PPLPPRQNV

10.85

-7.34

-5.43

PKLPPRGKQ

13.29

-4.90

-2.99

STSPKLPPR

14.64

-3.56

-1.65

P39521

AQPKPKPAQ

13.38

-4.27

-2.36

VDAQPKPKP

13.82

-6.09

-4.18

P24583

LPPQPRKHD

10.38

-7.74

-5.83

APLPPQPRK

11.57

-8.25

-6.34

PPQPRKHDK

13.35

-2.96

-1.05

Q08601

YAPPPGPPP

14.20

-7.25

-5.34

P19812

PIFRPGNIF

7.59

-7.49

-5.58

NSPEASPSL

13.63

-2.70

-0.79

PRPRRIPPT

14.40

-2.19

-0.28

Q12412

PPPAYDPNH

12.38

-5.44

-3.53

AYDPNHRPP

14.62

-4.75

-2.84

Q08412

KKWQPLPPE

13.71

-3.97

-2.06

IELPTQPVR

13.84

-3.52

-1.61

KNSRPQQPE

14.49

-2.29

-0.38

P53933

VAPPPLPNR

11.28

-6.94

-5.03

PPLPNRQLP

14.17

-7.31

-5.40

NDLPMELPH

14.83

-3.02

-1.11

Q12446

RPLPQLPNR

9.16

-8.47

-6.56

PQLPNRNNR

10.46

-6.72

-4.81

PPPPPHRHV

10.67

-6.76

-4.85

P38266

PPPPSRGNF

8.78

-9.38

-7.47

FLPPPKPFR

10.49

-7.41

-5.50

PILPPRNNV

10.56

-7.35

-5.44

P40483

PSVPPRNYF

13.00

-5.68

-3.77

P07244

TSEMPGMYP

12.15

-5.15

-3.24

P40563

PSERPKRRA

11.91

-5.07

-3.16

RAPPPVPKK

14.39

-5.57

-3.66

NSQPQGPSD

14.81

-1.14

0.77

Q07533

PHFPYGTWK

11.37

-1.80

0.11

NPLPPLPPL

12.53

-7.38

-5.47

SSMPNSPKK

12.57

-3.73

-1.82

P53901

RPIPPLPTE

12.63

-6.25

-4.34

LNSPKLPPL

14.21

-4.29

-2.38

PPLPTTSNS

14.48

-4.22

-2.31

P37254

GPGPGNPNN

14.58

-7.44

-5.53

Q12489

SYSRPSAPP

14.90

-5.17

-3.26

 


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