ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: PIN3_1CKA-28.PDB
Scoring matrix: PIN3_1CKA-28_mat
Uniprot code: Q06449
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 15.85
Foldx random average score for Saccharomyces cerevisiae: 14.173

Available information for Q06449 in MINT (Nov 2008):
Nš of interacting proteins: 38
 Proteins belonging to other specie: 0
Nš of interactions described: 44
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1431662
Proteins after disorder filtering: 4577
 Total fragments: 87994
Proteins after pattern filtering: 2188
 Total fragments: 13765
Proteins after MINT filtering: 26
 Total fragments: 369


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

15.85

0.19

0.00

Best peptides

FPRPYPPKLR

0.00

-6.75

-6.94

         
Interactors      
Q06604

SSPPPLPTRR

6.45

-6.97

-7.16

KPTPPSPPAK

6.78

-8.35

-8.54

EKGPRMPSRG

7.07

-7.13

-7.32

P24583

APLPPQPRKH

7.54

-8.23

-8.42

PPQPRKHDKT

9.92

-6.62

-6.81

ANAPLPPQPR

12.40

-5.16

-5.35

P38260

GGGPDDPTLM

10.48

-3.09

-3.28

Q04322

TPPTLPPRRI

9.31

-8.04

-8.23

STPPTLPPRR

11.30

-5.24

-5.43

ATPSKSPTSA

11.43

-4.34

-4.53

Q12168

NDDPYFPQFR

4.69

-7.87

-8.06

RGPPPLPPRA

8.12

-6.25

-6.44

PPLPPRANVQ

9.21

-8.60

-8.79

P15891

SAAPPPPPRR

7.40

-7.08

-7.27

DEPEGEPDVK

8.07

-4.71

-4.90

AAPPPPPRRA

8.73

-6.49

-6.68

Q12344

TSSPPLPPRQ

7.01

-5.11

-5.30

PKLPPRGKQR

7.07

-7.99

-8.18

PLPPRQNVAT

10.11

-5.17

-5.36

P39521

PHVPDRPPSQ

7.95

-3.22

-3.41

HVPDRPPSQL

9.32

-5.63

-5.82

QPKPKPAQDN

11.68

-6.37

-6.56

P40325

LPWTYPPRFY

5.36

-7.81

-8.00

QPRPPPRPQQ

6.39

-8.53

-8.72

YVQPGDPRLG

7.98

-8.35

-8.54

Q08601

RPMAPPPNQQ

5.86

-8.27

-8.46

APPPGPPPMA

6.53

-8.89

-9.08

PPPGPPPMAY

9.09

-8.58

-8.77

Q12532

PFKPYINGGD

9.47

-6.02

-6.21

P19812

APQNPPPILQ

6.04

-8.00

-8.19

SPIFRPGNIF

7.54

-7.18

-7.37

HSPIFRPGNI

9.27

-4.13

-4.32

Q12412

PPPAYDPNHR

4.75

-7.96

-8.15

DPNHRPPSSS

7.89

-6.13

-6.32

YDPNHRPPSS

9.37

-5.14

-5.33

Q08412

QPLPPEPLDT

9.51

-7.19

-7.38

IELPTQPVRK

9.72

-6.84

-7.03

EDVPPQLPTR

10.54

-8.49

-8.68

P53118

ENPHDLPSHL

10.62

-4.33

-4.52

NPHDLPSHLG

13.10

-7.01

-7.20

P38216

RPSNPPPSSA

8.01

-7.71

-7.90

SRPSNPPPSS

11.83

-4.72

-4.91

PSNPPPSSAH

12.79

-5.56

-5.75

P53933

PPPPPIPSTQ

6.54

-8.40

-8.59

VSYPGNPTSR

6.79

-5.11

-5.30

VAPPPLPNRQ

6.87

-5.67

-5.86

Q12446

RPVPPPPPMR

3.68

-9.86

-10.05

LPAPPPPPRR

4.32

-9.36

-9.55

APAPPPPPQM

6.48

-8.15

-8.34

P38266

FQPPPKPFRR

4.68

-8.79

-8.98

ITPPRPPPSR

4.91

-7.69

-7.88

QPQPPQPMQQ

6.36

-7.40

-7.59

P40483

ASKPSVPPRN

10.25

-4.07

-4.26

KDAPASKPSV

10.75

-6.44

-6.63

KPSVPPRNYF

10.82

-7.27

-7.46

P07244

MPGMYPPGHY

6.93

-8.84

-9.03

EMPGMYPPGH

8.33

-5.89

-6.08

PGMYPPGHYD

12.32

-5.35

-5.54

P40563

RRAPPPVPKK

8.31

-8.50

-8.69

SEVTPKVPER

10.30

-5.48

-5.67

NSEPPTPAGT

10.65

-5.18

-5.37

Q07533

PPLPPLPDLD

7.89

-7.60

-7.79

DPHFPYGTWK

8.19

-7.44

-7.63

VSSPKSPKAY

8.30

-5.34

-5.53

P53901

RPIPPLPTES

7.93

-8.22

-8.41

PPLPPIPTRD

8.21

-8.33

-8.52

QPPLPPIPTR

9.96

-9.18

-9.37

P37254

GPGPGNPNNG

9.65

-4.78

-4.97

GPGNPNNGAQ

10.48

-6.33

-6.52

PGNPNNGAQD

13.02

-3.64

-3.83

Q12489

RPSAPPPGYE

8.78

-7.41

-7.60

PSAPPPGYET

10.61

-6.09

-6.28

SRPSAPPPGY

11.52

-4.87

-5.06

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER