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Matrix information:
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ADAN-name: PEX13_1N5Z-29.PDB
Scoring matrix: PEX13_1N5Z-29_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 22.86
Foldx random average score for Saccharomyces cerevisiae: 15.735 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7178
Total fragments: 1482806
Proteins after disorder filtering: 4072
Total fragments: 54716
Proteins after pattern filtering: 2002
Total fragments: 11082
Proteins after MINT filtering: 5
Total fragments: 50
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
22.86
|
1.20 |
0.00 |
| Best peptides |
RRWWRRRRRK |
0.00
|
-8.46 |
-9.66 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P40450 |
SSPKLFPRLS |
8.73
|
-11.70 |
-12.90 |
|
APPPLPDLFK |
11.60
|
-10.76 |
-11.96 |
|
PPPPLPESLS |
12.20
|
-9.55 |
-10.75 |
| P47135 |
SYPGVFPVSG |
12.75
|
-6.53 |
-7.73 |
|
KTPRASPSRS |
12.92
|
-8.16 |
-9.36 |
|
GYFSYPGVFP |
13.15
|
-7.60 |
-8.80 |
| Q04370 |
PRPPFSSHSD |
12.19
|
-7.56 |
-8.76 |
|
EDIPRPPFSS |
12.45
|
-6.40 |
-7.60 |
|
DEDIPRPPFS |
13.18
|
-4.75 |
-5.95 |
| Q12110 |
PVAPSPNHRS |
13.01
|
-9.73 |
-10.93 |
| P15274 |
PPPPKPSYNS |
13.43
|
-7.65 |
-8.85 |
|
VVYPPPPKPS |
14.23
|
-7.93 |
-9.13 |
|
PGWVVYPPPP |
14.50
|
-5.31 |
-6.51 |
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