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Matrix information:
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ADAN-name: PEX13_1N5Z-21.PDB
Scoring matrix: PEX13_1N5Z-21_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 18.42
Foldx random average score for Saccharomyces cerevisiae: 17.411 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1901379
Proteins after disorder filtering: 4423
Total fragments: 73376
Proteins after pattern filtering: 1699
Total fragments: 4616
Proteins after MINT filtering: 6
Total fragments: 14
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAGGAAAA |
18.42
|
-0.63 |
0.00 |
| Best peptides |
EWRMGRPKRK |
0.00
|
-4.55 |
-3.92 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
PRPPFSSHSD |
16.65
|
-6.33 |
-5.70 |
| P40450 |
PPLPDLFKTK |
11.36
|
-3.94 |
-3.31 |
|
SSPKLFPRLS |
12.75
|
-5.23 |
-4.60 |
|
PPPPLPQSLL |
15.49
|
-4.69 |
-4.06 |
| P47135 |
KTPRASPSRS |
12.17
|
-4.01 |
-3.38 |
|
TPRASPSRSK |
15.64
|
-4.73 |
-4.10 |
|
TLSPGQPLNA |
16.58
|
-3.54 |
-2.91 |
| P15274 |
QNPKNKPGWV |
17.21
|
-5.60 |
-4.97 |
| P53112 |
ISPNGIPGID |
15.28
|
-2.58 |
-1.95 |
| Q12110 |
PVAPSPNHRS |
14.16
|
-4.38 |
-3.75 |
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