|
Matrix information:
(Help)
ADAN-name: PEX13_1N5Z-18.PDB
Scoring matrix: PEX13_1N5Z-18_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 18.89
Foldx random average score for Saccharomyces cerevisiae: 17.471 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1832194
Proteins after disorder filtering: 4609
Total fragments: 116601
Proteins after pattern filtering: 2280
Total fragments: 18267
Proteins after MINT filtering: 7
Total fragments: 69
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAAA |
18.89
|
2.75 |
0.00 |
| Best peptides |
FPPIRPIRCL |
0.00
|
0.35 |
-2.40 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
DIPRPPFSSH |
12.21
|
-1.50 |
-4.25 |
|
EDIPRPPFSS |
13.55
|
-1.93 |
-4.68 |
|
IPRPPFSSHS |
16.70
|
-3.25 |
-6.00 |
| P40450 |
SPKLFPRLSS |
9.57
|
-5.17 |
-7.92 |
|
PPPLPESLSM |
10.10
|
-6.39 |
-9.14 |
|
PPPPPPPLPQ |
10.88
|
-6.63 |
-9.38 |
| P47135 |
TPRASPSRSK |
10.34
|
-3.04 |
-5.79 |
|
ASTLSPGQPL |
10.38
|
-6.57 |
-9.32 |
|
YPGVFPVSGF |
11.55
|
-5.67 |
-8.43 |
| P15274 |
PPPKPSYNSD |
12.32
|
-3.38 |
-6.13 |
|
PPPPKPSYNS |
12.66
|
-5.52 |
-8.27 |
|
VVYPPPPKPS |
12.79
|
-4.87 |
-7.63 |
| P53112 |
FSISPNGIPG |
14.39
|
-4.95 |
-7.71 |
|
SISPNGIPGI |
15.62
|
-2.67 |
-5.42 |
|
SPNGIPGIDT |
17.35
|
-1.76 |
-4.51 |
| Q08446 |
NSSHSPISPL |
10.81
|
-4.57 |
-7.33 |
| Q12110 |
SPVAPSPNHR |
13.77
|
-2.73 |
-5.48 |
|
GSPVAPSPNH |
15.26
|
-1.41 |
-4.17 |
|
NSQGSPVAPS |
16.61
|
-2.03 |
-4.79 |
|
