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Matrix information:
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ADAN-name: PEX13_1JQQ-28.PDB
Scoring matrix: PEX13_1JQQ-28_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.73
Foldx random average score for Saccharomyces cerevisiae: 15.999 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1514405
Proteins after disorder filtering: 4289
Total fragments: 62534
Proteins after pattern filtering: 2081
Total fragments: 11677
Proteins after MINT filtering: 6
Total fragments: 51
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
18.73
|
9.24 |
0.00 |
| Best peptides |
RDPWRPRKKK |
0.00
|
-5.51 |
-14.75 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
EDIPRPPFSS |
12.85
|
1.42 |
-7.82 |
|
DIPRPPFSSH |
13.97
|
-4.30 |
-13.54 |
|
IPRPPFSSHS |
14.05
|
-0.19 |
-9.43 |
| P40450 |
APPPLPDLFK |
11.42
|
-3.03 |
-12.27 |
|
PPPLPESLSM |
12.05
|
-3.92 |
-13.16 |
|
PPLPDLFKTK |
12.42
|
-1.65 |
-10.89 |
| P47135 |
SKTPRASPSR |
10.23
|
-2.93 |
-12.17 |
|
TPRASPSRSK |
11.15
|
0.30 |
-8.94 |
|
YFSYPGVFPV |
11.92
|
-4.30 |
-13.54 |
| P15274 |
YPPPPKPSYN |
10.67
|
-4.88 |
-14.12 |
|
GWVVYPPPPK |
11.32
|
0.71 |
-8.53 |
|
QNPKNKPGWV |
13.34
|
-3.78 |
-13.02 |
| Q08446 |
SSHSPISPLK |
12.25
|
-0.16 |
-9.40 |
| Q12110 |
SPVAPSPNHR |
13.02
|
-1.69 |
-10.93 |
|
PVAPSPNHRS |
15.18
|
-2.68 |
-11.92 |
|
