|
Matrix information:
(Help)
ADAN-name: PEX13_1JQQ-27.PDB
Scoring matrix: PEX13_1JQQ-27_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 13.85
Foldx random average score for Saccharomyces cerevisiae: 17.731 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1713449
Proteins after disorder filtering: 4701
Total fragments: 155007
Proteins after pattern filtering: 2323
Total fragments: 21424
Proteins after MINT filtering: 7
Total fragments: 86
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAAA |
13.85
|
-0.97 |
0.00 |
| Best peptides |
FHRPRWPRK |
0.00
|
-6.42 |
-5.45 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
PRPPFSSHS |
8.92
|
-6.81 |
-5.84 |
|
IPRPPFSSH |
9.79
|
-6.62 |
-5.65 |
|
EDIPRPPFS |
10.08
|
-5.18 |
-4.21 |
| P40450 |
LPPPPPPPP |
8.14
|
-9.53 |
-8.56 |
|
VPPPPPPPP |
8.38
|
-8.39 |
-7.42 |
|
AVPPPPPPP |
9.10
|
-8.33 |
-7.36 |
| P47135 |
SKTPRASPS |
7.34
|
-5.09 |
-4.12 |
|
FPLPPPNVN |
8.42
|
-7.39 |
-6.42 |
|
TPRASPSRS |
9.01
|
-6.60 |
-5.63 |
| P15274 |
VYPPPPKPS |
9.13
|
-7.95 |
-6.98 |
|
YPPPPKPSY |
9.22
|
-9.12 |
-8.15 |
|
VVYPPPPKP |
9.33
|
-8.26 |
-7.29 |
| P53112 |
FSISPNGIP |
11.61
|
-5.69 |
-4.72 |
|
SPNGIPGID |
13.06
|
-2.74 |
-1.77 |
|
ISPNGIPGI |
15.88
|
-3.53 |
-2.56 |
| Q08446 |
SHSPISPLK |
7.26
|
-6.95 |
-5.98 |
|
SSHSPISPL |
11.04
|
-3.85 |
-2.88 |
| Q12110 |
SPVAPSPNH |
10.73
|
-4.49 |
-3.52 |
|
SQGSPVAPS |
11.21
|
-3.37 |
-2.40 |
|
PVAPSPNHR |
12.32
|
-4.65 |
-3.68 |
|
