|
Matrix information:
(Help)
ADAN-name: PEX13_1JQQ-19.PDB
Scoring matrix: PEX13_1JQQ-19_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.72
Foldx random average score for Saccharomyces cerevisiae: 16.935 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1542241
Proteins after disorder filtering: 4544
Total fragments: 73292
Proteins after pattern filtering: 2104
Total fragments: 8616
Proteins after MINT filtering: 7
Total fragments: 36
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
17.72
|
-1.04 |
0.00 |
| Best peptides |
RDFKRGRRL |
0.00
|
-5.91 |
-4.87 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
IPRPPFSSH |
12.13
|
-6.46 |
-5.42 |
|
PRPPFSSHS |
14.54
|
-6.66 |
-5.62 |
| P40450 |
SSPKLFPRL |
10.92
|
-5.95 |
-4.91 |
|
PPLPNGLLS |
12.56
|
-5.62 |
-4.58 |
|
LVTPPAPPL |
13.41
|
-6.86 |
-5.82 |
| P47135 |
PRASPSRSK |
11.77
|
-8.52 |
-7.48 |
|
KTPRASPSR |
13.32
|
-5.48 |
-4.44 |
|
STLSPGQPL |
13.98
|
-6.72 |
-5.68 |
| P15274 |
PKNKPGWVV |
10.62
|
-7.09 |
-6.05 |
|
QNPKNKPGW |
13.88
|
-3.93 |
-2.89 |
|
DDQNPKNKP |
14.16
|
-8.93 |
-7.89 |
| P53112 |
SISPNGIPG |
14.91
|
-4.99 |
-3.95 |
|
PNGIPGIDT |
16.23
|
-2.67 |
-1.63 |
| Q08446 |
SHSPISPLK |
16.21
|
-3.48 |
-2.44 |
| Q12110 |
SPVAPSPNH |
14.62
|
-3.97 |
-2.93 |
|
QGSPVAPSP |
15.14
|
-7.63 |
-6.59 |
|
