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Matrix information:
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ADAN-name: PEX13_1JQQ-16.PDB
Scoring matrix: PEX13_1JQQ-16_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.58
Foldx random average score for Saccharomyces cerevisiae: 18.848 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1952136
Proteins after disorder filtering: 4769
Total fragments: 172823
Proteins after pattern filtering: 2329
Total fragments: 19839
Proteins after MINT filtering: 7
Total fragments: 73
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
15.58
|
5.74 |
0.00 |
| Best peptides |
YPPIRSEEP |
0.00
|
0.36 |
-5.38 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
DIPRPPFSS |
13.37
|
-2.30 |
-8.04 |
|
EDIPRPPFS |
13.74
|
0.69 |
-5.05 |
|
IPRPPFSSH |
16.05
|
-2.41 |
-8.15 |
| P40450 |
SPKLFPRLS |
9.60
|
-4.84 |
-10.58 |
|
LPQLPPPPP |
10.83
|
-8.36 |
-14.10 |
|
HDLVTPPAP |
11.48
|
-0.27 |
-6.01 |
| P47135 |
YPGVFPVSG |
8.56
|
-5.35 |
-11.09 |
|
YFSYPGVFP |
9.29
|
0.42 |
-5.32 |
|
KEQCPFPLP |
10.97
|
-1.92 |
-7.66 |
| P15274 |
PPPKPSYNS |
8.97
|
-1.76 |
-7.50 |
|
DDQNPKNKP |
9.87
|
-2.57 |
-8.31 |
|
PPPPKPSYN |
13.61
|
-0.98 |
-6.72 |
| P53112 |
FSISPNGIP |
12.49
|
-1.63 |
-7.37 |
|
PNGIPGIDT |
13.27
|
3.08 |
-2.66 |
|
SISPNGIPG |
18.08
|
-0.89 |
-6.63 |
| Q08446 |
NSSHSPISP |
9.46
|
-0.67 |
-6.41 |
| Q12110 |
SPVAPSPNH |
13.54
|
1.88 |
-3.86 |
|
NSQGSPVAP |
14.14
|
0.16 |
-5.58 |
|
QGSPVAPSP |
16.27
|
1.46 |
-4.28 |
|
