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Matrix information:
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ADAN-name: PEX13_1JQQ-15.PDB
Scoring matrix: PEX13_1JQQ-15_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.66
Foldx random average score for Saccharomyces cerevisiae: 13.533 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1360345
Proteins after disorder filtering: 4167
Total fragments: 46271
Proteins after pattern filtering: 1828
Total fragments: 6629
Proteins after MINT filtering: 5
Total fragments: 18
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.66
|
-0.45 |
0.00 |
| Best peptides |
RWKIIRKKR |
0.00
|
-9.11 |
-8.66 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P40450 |
HDLVTPPAP |
11.47
|
-4.63 |
-4.18 |
|
SSPKLFPRL |
12.40
|
-2.28 |
-1.83 |
|
PPPLPDLFK |
12.52
|
-3.93 |
-3.48 |
| P47135 |
KTPRASPSR |
9.42
|
-3.46 |
-3.01 |
|
YPGVFPVSG |
11.14
|
-6.90 |
-6.45 |
|
FPLPPPNVN |
11.31
|
-4.70 |
-4.25 |
| Q04370 |
DIPRPPFSS |
12.94
|
-3.44 |
-2.99 |
| Q12110 |
PVAPSPNHR |
12.99
|
-3.53 |
-3.08 |
| P15274 |
YPPPPKPSY |
11.12
|
-7.14 |
-6.69 |
|
NPKNKPGWV |
11.38
|
-4.50 |
-4.05 |
|
PPPPKPSYN |
12.82
|
-4.09 |
-3.64 |
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