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Matrix information:
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ADAN-name: PEX13_1JQQ-14.PDB
Scoring matrix: PEX13_1JQQ-14_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.48
Foldx random average score for Saccharomyces cerevisiae: 13.521 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1572234
Proteins after disorder filtering: 4414
Total fragments: 63192
Proteins after pattern filtering: 1970
Total fragments: 7391
Proteins after MINT filtering: 7
Total fragments: 31
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.48
|
-0.98 |
0.00 |
| Best peptides |
RWFRIHKDL |
0.00
|
-8.55 |
-7.57 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
DIPRPPFSS |
11.62
|
-4.46 |
-3.48 |
|
DEDIPRPPF |
11.99
|
-6.42 |
-5.44 |
| P40450 |
SSPKLFPRL |
7.83
|
-5.78 |
-4.80 |
|
APPLPNGLL |
8.51
|
-7.83 |
-6.85 |
|
PPPLPQSLL |
9.47
|
-8.35 |
-7.37 |
| P47135 |
KTPRASPSR |
9.38
|
-7.55 |
-6.57 |
|
PFPLPPPNV |
10.44
|
-7.11 |
-6.13 |
|
NFGPLPEPL |
11.85
|
-4.50 |
-3.52 |
| P15274 |
NPKNKPGWV |
11.59
|
-5.89 |
-4.91 |
|
PPPKPSYNS |
11.68
|
-4.42 |
-3.44 |
|
PPPPKPSYN |
12.17
|
-5.47 |
-4.49 |
| P53112 |
PNGIPGIDT |
12.43
|
-2.87 |
-1.89 |
| Q08446 |
SSHSPISPL |
11.41
|
-4.39 |
-3.41 |
| Q12110 |
GSPVAPSPN |
13.11
|
-4.27 |
-3.29 |
|
PVAPSPNHR |
13.26
|
-5.29 |
-4.31 |
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