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Matrix information:
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ADAN-name: NBP2_1YN8-8.PDB
Scoring matrix: NBP2_1YN8-8_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.96
Foldx random average score for Saccharomyces cerevisiae: 12.016 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7178
Total fragments: 1382032
Proteins after disorder filtering: 4431
Total fragments: 76082
Proteins after pattern filtering: 2226
Total fragments: 14052
Proteins after MINT filtering: 8
Total fragments: 132
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
14.96
|
-1.31 |
0.00 |
| Best peptides |
HWRPRWPR |
0.00
|
-1.57 |
-0.26 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
STPSRPVP |
7.47
|
-4.63 |
-3.32 |
|
SPPPIPKT |
8.79
|
-5.97 |
-4.66 |
|
SKPLPPQL |
9.08
|
-3.34 |
-2.03 |
| P53933 |
APPPLPNR |
6.69
|
-6.99 |
-5.68 |
|
RRRPPPPP |
6.98
|
-5.12 |
-3.81 |
|
TRRRPPPP |
7.41
|
-4.52 |
-3.21 |
| P53914 |
NVKPLPPK |
8.23
|
-4.82 |
-3.51 |
|
KNVKPLPP |
9.42
|
-4.41 |
-3.10 |
|
VKPLPPKE |
9.95
|
-3.11 |
-1.80 |
| P48562 |
LNPYRPHH |
5.48
|
-4.56 |
-3.25 |
|
QAPKRPDA |
6.54
|
-5.22 |
-3.91 |
|
GPAPRPPS |
7.51
|
-5.88 |
-4.57 |
| Q03497 |
FIPSRPAP |
5.31
|
-3.67 |
-2.36 |
|
KPKVKPSK |
7.85
|
-5.66 |
-4.35 |
|
SFPSKNPL |
8.46
|
-4.03 |
-2.72 |
| Q12469 |
KPFPRPSD |
7.22
|
-5.03 |
-3.72 |
|
ELKPFPRP |
8.63
|
-5.13 |
-3.82 |
|
LKPFPRPS |
9.79
|
-3.38 |
-2.07 |
| P25293 |
APTPHNTP |
9.73
|
-3.46 |
-2.15 |
|
TPHNTPAS |
11.17
|
-3.50 |
-2.19 |
| P08018 |
GPPPRLPS |
5.49
|
-7.54 |
-6.23 |
|
RAPRRPLS |
6.62
|
-5.10 |
-3.79 |
|
QHPTRPNV |
6.79
|
-4.90 |
-3.59 |
|
