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Matrix information:
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ADAN-name: NBP2_1YN8-27.PDB
Scoring matrix: NBP2_1YN8-27_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 17.09
Foldx random average score for Saccharomyces cerevisiae: 17.100 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1590820
Proteins after disorder filtering: 4685
Total fragments: 127307
Proteins after pattern filtering: 2271
Total fragments: 16502
Proteins after MINT filtering: 8
Total fragments: 157
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAAA |
17.09
|
3.34 |
0.00 |
| Best peptides |
RKRRRRKWR |
0.00
|
-3.09 |
-6.43 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
STPSRPVPP |
10.13
|
-1.34 |
-4.68 |
|
TPSRPVPPD |
10.17
|
-0.34 |
-3.68 |
|
PKREAPKPP |
10.42
|
-1.20 |
-4.54 |
| P53933 |
RTRRRPPPP |
3.97
|
-5.06 |
-8.40 |
|
TRRRPPPPP |
8.44
|
-3.70 |
-7.04 |
|
KRVAPPPLP |
11.83
|
-3.86 |
-7.20 |
| P53914 |
KNVKPLPPK |
11.98
|
-0.81 |
-4.15 |
|
KPLPPKEDD |
15.99
|
-0.10 |
-3.44 |
|
NVKPLPPKE |
16.98
|
-1.69 |
-5.03 |
| P48562 |
FPRGPMHPN |
9.45
|
-3.41 |
-6.75 |
|
IGPAPRPPS |
9.89
|
-3.68 |
-7.02 |
|
SAPRAPYPS |
10.58
|
-0.05 |
-3.39 |
| Q03497 |
FIPSRPAPK |
8.20
|
-3.60 |
-6.94 |
|
IPSRPAPKP |
8.90
|
-2.02 |
-5.36 |
|
SRPAPKPPS |
11.51
|
-2.10 |
-5.44 |
| Q12469 |
KPFPRPSDD |
12.44
|
-1.06 |
-4.40 |
|
HRLAPSAPA |
13.05
|
-3.72 |
-7.06 |
|
LKPFPRPSD |
13.24
|
0.51 |
-2.83 |
| P25293 |
PTPHNTPAS |
13.39
|
0.35 |
-2.99 |
|
TPHNTPASV |
16.16
|
0.80 |
-2.54 |
| P08018 |
RAPRRPLST |
7.78
|
-2.68 |
-6.02 |
|
STQHPTRPN |
10.43
|
-3.53 |
-6.87 |
|
APRRPLSTQ |
10.83
|
-1.78 |
-5.12 |
|
