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Matrix information:
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ADAN-name: NBP2_1YN8-26.PDB
Scoring matrix: NBP2_1YN8-26_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.23
Foldx random average score for Saccharomyces cerevisiae: 13.544 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1437505
Proteins after disorder filtering: 4229
Total fragments: 65201
Proteins after pattern filtering: 2176
Total fragments: 15612
Proteins after MINT filtering: 8
Total fragments: 151
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.23
|
-2.36 |
0.00 |
| Best peptides |
RRRRRRFPR |
0.00
|
-6.56 |
-4.20 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
PSYPSIFRR |
7.88
|
-6.58 |
-4.22 |
|
RSKPLPPQL |
8.52
|
-6.13 |
-3.77 |
|
RTEPSTPSR |
9.04
|
-5.91 |
-3.55 |
| P53933 |
RTRRRPPPP |
6.44
|
-6.79 |
-4.43 |
|
RRRPPPPPI |
6.65
|
-6.75 |
-4.39 |
|
TRRRPPPPP |
7.61
|
-6.72 |
-4.36 |
| P53914 |
KNVKPLPPK |
9.46
|
-6.26 |
-3.90 |
|
KPLPPKEDD |
11.47
|
-4.09 |
-1.73 |
|
NVKPLPPKE |
11.66
|
-5.30 |
-2.94 |
| P48562 |
RQAPKRPDA |
8.52
|
-8.87 |
-6.51 |
|
SAPRAPYPS |
9.06
|
-4.81 |
-2.45 |
|
PLNPYRPHH |
9.20
|
-8.20 |
-5.84 |
| Q03497 |
HKPKVKPSK |
7.91
|
-6.88 |
-4.52 |
|
KFIPSRPAP |
8.29
|
-8.31 |
-5.95 |
|
KVKPSKPEA |
8.47
|
-6.73 |
-4.37 |
| Q12469 |
LKPFPRPSD |
9.13
|
-7.18 |
-4.82 |
|
ELKPFPRPS |
9.84
|
-6.05 |
-3.69 |
|
RLAPSAPAT |
12.23
|
-4.76 |
-2.40 |
| P25293 |
PTPHNTPAS |
13.48
|
-5.23 |
-2.87 |
| P08018 |
DGPPPRLPS |
7.66
|
-7.64 |
-5.28 |
|
RAPRRPLST |
8.94
|
-5.54 |
-3.18 |
|
TQHPTRPNV |
10.38
|
-9.16 |
-6.80 |
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