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Matrix information:
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ADAN-name: NBP2_1YN8-25.PDB
Scoring matrix: NBP2_1YN8-25_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 14.58
Foldx random average score for Saccharomyces cerevisiae: 14.350 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1521220
Proteins after disorder filtering: 4632
Total fragments: 104957
Proteins after pattern filtering: 2314
Total fragments: 19138
Proteins after MINT filtering: 8
Total fragments: 171
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
14.58
|
1.86 |
0.00 |
| Best peptides |
HRRPMGMRP |
0.00
|
-7.13 |
-8.99 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
STPSRPVPP |
6.76
|
-3.34 |
-5.20 |
|
PKREAPKPP |
7.53
|
-2.77 |
-4.63 |
|
SRPVPPDSS |
7.60
|
-5.06 |
-6.92 |
| P53933 |
TRRRPPPPP |
4.58
|
-4.43 |
-6.29 |
|
RRPPPPPIP |
4.61
|
-7.32 |
-9.18 |
|
KRVAPPPLP |
5.28
|
-3.46 |
-5.32 |
| P53914 |
NVKPLPPKE |
6.98
|
-3.68 |
-5.54 |
|
AKNVKPLPP |
7.79
|
-3.46 |
-5.32 |
|
PLPPKEDDE |
9.76
|
-1.74 |
-3.60 |
| P48562 |
TMRQAPKRP |
5.81
|
-3.36 |
-5.22 |
|
QFPRGPMHP |
6.91
|
-3.71 |
-5.57 |
|
GGVAKPKKP |
7.82
|
-3.64 |
-5.50 |
| Q03497 |
KPKVKPSKP |
5.89
|
-3.63 |
-5.49 |
|
KFIPSRPAP |
6.89
|
-2.90 |
-4.76 |
|
SRPAPKPPS |
7.12
|
-5.42 |
-7.28 |
| Q12469 |
ELKPFPRPS |
6.80
|
-2.37 |
-4.23 |
|
PHRLAPSAP |
7.71
|
-0.67 |
-2.53 |
|
KPFPRPSDD |
9.47
|
-2.53 |
-4.39 |
| P25293 |
NAPTPHNTP |
11.46
|
0.83 |
-1.03 |
|
APTPHNTPA |
12.44
|
0.45 |
-1.41 |
| P08018 |
GPPPRLPSD |
9.04
|
-2.60 |
-4.46 |
|
QHPTRPNVA |
9.21
|
-3.11 |
-4.97 |
|
PRRPLSTQH |
9.38
|
-2.83 |
-4.69 |
|
