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Matrix information:
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ADAN-name: NBP2_1YN8-18.PDB
Scoring matrix: NBP2_1YN8-18_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 17.08
Foldx random average score for Saccharomyces cerevisiae: 16.712 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1600578
Proteins after disorder filtering: 4592
Total fragments: 109408
Proteins after pattern filtering: 2234
Total fragments: 15737
Proteins after MINT filtering: 8
Total fragments: 141
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAAA |
17.08
|
0.46 |
0.00 |
| Best peptides |
RPPIPPRHQY |
0.00
|
6.31 |
5.85 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RYPQTPSYYY |
8.25
|
-1.95 |
-2.40 |
|
YPQTPSYYYD |
9.13
|
-2.95 |
-3.41 |
|
SPSYPSIFRR |
9.44
|
-0.06 |
-0.52 |
| P53933 |
APPPLPNRQL |
8.98
|
-2.50 |
-2.96 |
|
RPPPPPIPST |
9.44
|
-1.28 |
-1.74 |
|
PPPPIPSTQK |
12.25
|
-1.40 |
-1.86 |
| P53914 |
LPPIDPKDGG |
8.62
|
-4.31 |
-4.76 |
|
VKPLPPKEDD |
10.28
|
-2.59 |
-3.04 |
|
AKNVKPLPPK |
14.55
|
-0.96 |
-1.42 |
| P48562 |
LNPYRPHHNM |
7.84
|
-4.01 |
-4.46 |
|
SPLNPYRPHH |
9.76
|
0.39 |
-0.07 |
|
KPPISAPRAP |
10.94
|
-5.71 |
-6.17 |
| Q03497 |
LPPIPPTKSK |
5.00
|
-5.36 |
-5.82 |
|
FPSKNPLKNS |
7.44
|
-5.51 |
-5.96 |
|
KPSKPEAKSK |
8.78
|
-4.15 |
-4.61 |
| Q12469 |
ELKPFPRPSD |
11.91
|
-0.07 |
-0.53 |
|
LKPFPRPSDD |
12.38
|
-0.88 |
-1.34 |
|
RPHRLAPSAP |
12.61
|
-4.04 |
-4.50 |
| P25293 |
NAPTPHNTPA |
15.59
|
-0.40 |
-0.85 |
|
APTPHNTPAS |
16.32
|
-1.06 |
-1.52 |
| P08018 |
PPRLPSDKFS |
9.56
|
-3.67 |
-4.13 |
|
APRRPLSTQH |
10.06
|
-1.94 |
-2.40 |
|
HPTRPNVAPH |
10.59
|
-2.61 |
-3.06 |
|
