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Matrix information:
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ADAN-name: NBP2_1YN8-17.PDB
Scoring matrix: NBP2_1YN8-17_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.54
Foldx random average score for Saccharomyces cerevisiae: 15.009 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1524282
Proteins after disorder filtering: 4592
Total fragments: 77450
Proteins after pattern filtering: 2103
Total fragments: 9020
Proteins after MINT filtering: 8
Total fragments: 81
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
15.54
|
-0.35 |
0.00 |
| Best peptides |
RRYMRGHKL |
0.00
|
-7.84 |
-7.49 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RRYPQTPSY |
7.26
|
-5.91 |
-5.56 |
|
RPVPPDSSY |
8.00
|
-6.84 |
-6.49 |
|
YPQTPSYYY |
10.47
|
-3.65 |
-3.30 |
| P53933 |
PPPPPIPST |
11.94
|
-2.65 |
-2.30 |
|
PPLPNRQLP |
13.67
|
-3.65 |
-3.30 |
|
PPPLPNRQL |
14.02
|
-4.53 |
-4.18 |
| P53914 |
KPLPPKEDD |
13.03
|
-2.23 |
-1.88 |
|
KNVKPLPPK |
13.80
|
-2.89 |
-2.54 |
|
PIDPKDGGR |
14.39
|
-1.38 |
-1.03 |
| P48562 |
NPYRPHHNM |
9.47
|
-5.90 |
-5.55 |
|
YSKQPQSPL |
10.84
|
-4.06 |
-3.71 |
|
MRQAPKRPD |
11.74
|
-3.28 |
-2.93 |
| Q03497 |
KPSKPEAKS |
10.00
|
-5.00 |
-4.65 |
|
IPSRPAPKP |
11.23
|
-6.52 |
-6.17 |
|
PIPPTKSKT |
11.58
|
-1.91 |
-1.56 |
| Q12469 |
LKPFPRPSD |
11.62
|
-3.14 |
-2.79 |
|
RLAPSAPAT |
11.65
|
-2.45 |
-2.10 |
|
APSAPATKN |
13.05
|
-2.24 |
-1.89 |
| P25293 |
PTPHNTPAS |
12.95
|
0.13 |
0.48 |
| P08018 |
GPPPRLPSD |
11.57
|
-2.33 |
-1.98 |
|
PRLPSDKFS |
12.81
|
-1.34 |
-0.99 |
|
APRRPLSTQ |
12.86
|
-1.38 |
-1.03 |
|
