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Matrix information:
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ADAN-name: NBP2_1YN8-16.PDB
Scoring matrix: NBP2_1YN8-16_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.88
Foldx random average score for Saccharomyces cerevisiae: 18.399 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1785044
Proteins after disorder filtering: 4747
Total fragments: 145106
Proteins after pattern filtering: 2297
Total fragments: 17001
Proteins after MINT filtering: 8
Total fragments: 156
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
16.88
|
0.65 |
0.00 |
| Best peptides |
RPPIPSRRH |
0.00
|
-2.30 |
-2.95 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
APTKPNPQG |
12.32
|
-3.38 |
-4.03 |
|
KPLPPQLLS |
12.97
|
-1.62 |
-2.27 |
|
SPTSPKSLD |
13.50
|
-0.29 |
-0.94 |
| P53933 |
RPPPPPIPS |
11.24
|
-4.26 |
-4.91 |
|
YNDLPMELP |
12.30
|
-2.45 |
-3.10 |
|
RRPPPPPIP |
13.54
|
-0.97 |
-1.62 |
| P53914 |
LPPIDPKDG |
9.97
|
-4.07 |
-4.72 |
|
VKPLPPKED |
11.22
|
-2.67 |
-3.32 |
|
KPLPPKEDD |
15.52
|
-0.48 |
-1.13 |
| P48562 |
KPPISAPRA |
6.76
|
-5.00 |
-5.65 |
|
RGPMHPNNS |
9.68
|
-1.87 |
-2.52 |
|
LNPYRPHHN |
10.40
|
-3.64 |
-4.29 |
| Q03497 |
LPPIPPTKS |
7.50
|
-4.33 |
-4.98 |
|
FPSKNPLKN |
8.43
|
-4.68 |
-5.33 |
|
GKFIPSRPA |
9.41
|
-2.02 |
-2.67 |
| Q12469 |
LKPFPRPSD |
11.80
|
-0.53 |
-1.18 |
|
APSAPATKN |
13.94
|
-1.98 |
-2.63 |
|
PFPRPSDDD |
14.34
|
-0.39 |
-1.04 |
| P25293 |
NAPTPHNTP |
14.61
|
0.73 |
0.08 |
|
APTPHNTPA |
17.43
|
-0.76 |
-1.41 |
| P08018 |
PPRLPSDKF |
11.02
|
-2.47 |
-3.12 |
|
QHPTRPNVA |
12.13
|
-0.23 |
-0.88 |
|
APRRPLSTQ |
13.08
|
-2.65 |
-3.30 |
|
