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Matrix information:
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ADAN-name: NBP2_1YN8-14.PDB
Scoring matrix: NBP2_1YN8-14_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 18.25
Foldx random average score for Saccharomyces cerevisiae: 14.695 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1377196
Proteins after disorder filtering: 4004
Total fragments: 39392
Proteins after pattern filtering: 1714
Total fragments: 5574
Proteins after MINT filtering: 8
Total fragments: 66
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
18.25
|
-0.08 |
0.00 |
| Best peptides |
RWKRRRWWR |
0.00
|
-5.07 |
-4.99 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RYPQTPSYY |
10.44
|
-1.17 |
-1.09 |
|
KRSKPLPPQ |
11.71
|
-5.30 |
-5.22 |
|
SPSYPSIFR |
12.04
|
-2.60 |
-2.52 |
| P53933 |
PPPIPSTQK |
12.02
|
-3.03 |
-2.95 |
|
APPPLPNRQ |
13.45
|
-1.50 |
-1.42 |
|
RPPPPPIPS |
14.07
|
-5.50 |
-5.42 |
| P53914 |
LPPIDPKDG |
11.89
|
-3.86 |
-3.78 |
|
KNVKPLPPK |
12.91
|
-4.24 |
-4.16 |
|
KPLPPKEDD |
14.21
|
-0.11 |
-0.03 |
| P48562 |
KPPISAPRA |
10.68
|
-4.41 |
-4.33 |
|
RQAPKRPDA |
11.25
|
-3.09 |
-3.01 |
|
NPYRPHHNM |
11.59
|
-8.11 |
-8.03 |
| Q03497 |
HKPKVKPSK |
9.95
|
-3.30 |
-3.22 |
|
LPPIPPTKS |
11.13
|
-4.73 |
-4.65 |
|
FPSKNPLKN |
11.57
|
-2.94 |
-2.86 |
| Q12469 |
LKPFPRPSD |
12.41
|
-0.08 |
0.00 |
|
RLAPSAPAT |
14.35
|
-0.83 |
-0.75 |
|
PFPRPSDDD |
14.41
|
-1.65 |
-1.57 |
| P25293 |
TPHNTPASV |
13.80
|
0.00 |
0.08 |
| P08018 |
RAPRRPLST |
9.35
|
-4.27 |
-4.19 |
|
APRRPLSTQ |
10.59
|
-5.73 |
-5.65 |
|
PPPRLPSDK |
11.20
|
-4.96 |
-4.88 |
|
