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Matrix information:
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ADAN-name: NBP2_1YN8-12.PDB
Scoring matrix: NBP2_1YN8-12_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 9.72
Foldx random average score for Saccharomyces cerevisiae: 7.407 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1350843
Proteins after disorder filtering: 4455
Total fragments: 63967
Proteins after pattern filtering: 2178
Total fragments: 12823
Proteins after MINT filtering: 7
Total fragments: 131
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
9.72
|
-0.86 |
0.00 |
| Best peptides |
RWWFRMMR |
0.00
|
-3.51 |
-2.65 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
PSYPSIFR |
4.13
|
-2.41 |
-1.55 |
|
SSPPPIPK |
4.34
|
-2.65 |
-1.79 |
|
RSKPLPPQ |
4.91
|
-3.27 |
-2.41 |
| P53933 |
RRRPPPPP |
4.31
|
-3.85 |
-2.99 |
|
VAPPPLPN |
4.54
|
-3.90 |
-3.04 |
|
RRPPPPPI |
4.56
|
-3.35 |
-2.49 |
| P53914 |
KNVKPLPP |
4.25
|
-4.14 |
-3.28 |
|
NVKPLPPK |
5.15
|
-2.72 |
-1.86 |
|
KPLPPKED |
5.46
|
-3.58 |
-2.72 |
| P48562 |
VAKPKKPA |
4.30
|
-2.73 |
-1.87 |
|
IGPAPRPP |
4.87
|
-3.14 |
-2.28 |
|
RQAPKRPD |
5.18
|
-3.18 |
-2.32 |
| Q03497 |
KVKPSKPE |
3.79
|
-3.14 |
-2.28 |
|
KSFPSKNP |
4.09
|
-2.95 |
-2.09 |
|
HKPKVKPS |
4.66
|
-3.25 |
-2.39 |
| P08018 |
DGPPPRLP |
4.30
|
-2.74 |
-1.88 |
|
TQHPTRPN |
5.08
|
-3.03 |
-2.17 |
|
GPPPRLPS |
5.44
|
-3.64 |
-2.78 |
| Q12469 |
LKPFPRPS |
3.32
|
-3.14 |
-2.28 |
|
ELKPFPRP |
5.47
|
-2.95 |
-2.09 |
|
KPFPRPSD |
6.01
|
-3.03 |
-2.17 |
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