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Matrix information:
(Help) ADAN-name: NBP2_1SEM-9.PDB Scoring matrix: NBP2_1SEM-9_mat Uniprot code: Q12163 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAA Foldx wt ligand score: 19.23 Foldx random average score for Saccharomyces cerevisiae: 14.429 Available information for Q12163 in MINT (Nov 2008): Nš of interacting proteins: 10 Proteins belonging to other specie: 0 Nš of interactions described: 20 Interactions with other species: 0
Genome scanning information:
Subcellular location: False Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 7179 Total fragments: 3214721 Proteins after random average filtering: 7179 Total fragments: 1303716 Proteins after disorder filtering: 4246 Total fragments: 49815 Proteins after pattern filtering: 1987 Total fragments: 9481 Proteins after MINT filtering: 7 Total fragments: 93
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
19.23
|
-2.90 |
0.00 |
| Best peptides |
RRPRPPFY |
0.00
|
-13.15 |
-10.25 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
KRSKPLPP |
8.72
|
-7.62 |
-4.71 |
|
YPQTPSYY |
9.06
|
-8.19 |
-5.29 |
|
TPSRPVPP |
9.95
|
-8.88 |
-5.98 |
| P53933 |
TRRRPPPP |
7.06
|
-9.63 |
-6.73 |
|
RRRPPPPP |
8.43
|
-9.00 |
-6.10 |
|
RRPPPPPI |
8.48
|
-9.20 |
-6.29 |
| P53914 |
VKPLPPKE |
10.29
|
-8.08 |
-5.18 |
|
KNVKPLPP |
11.38
|
-7.13 |
-4.22 |
|
LPPIDPKD |
11.45
|
-6.32 |
-3.42 |
| P48562 |
NPYRPHHN |
8.96
|
-11.12 |
-8.21 |
|
MRQAPKRP |
9.36
|
-6.95 |
-4.04 |
|
QFPRGPMH |
9.87
|
-9.46 |
-6.56 |
| Q03497 |
IPSRPAPK |
8.85
|
-11.12 |
-8.21 |
|
FPSKNPLK |
10.02
|
-7.49 |
-4.59 |
|
LPPIPPTK |
10.11
|
-8.41 |
-5.51 |
| P08018 |
RAPRRPLS |
7.13
|
-10.62 |
-7.71 |
|
HPTRPNVA |
7.48
|
-10.98 |
-8.08 |
|
APRRPLST |
9.62
|
-8.49 |
-5.59 |
| Q12469 |
HRLAPSAP |
10.78
|
-5.38 |
-2.48 |
|
PFPRPSDD |
11.31
|
-9.37 |
-6.46 |
|
LKPFPRPS |
11.48
|
-6.39 |
-3.48 |
|