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Matrix information:
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ADAN-name: NBP2_1SEM-8.PDB
Scoring matrix: NBP2_1SEM-8_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 13.89
Foldx random average score for Saccharomyces cerevisiae: 10.855 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1303079
Proteins after disorder filtering: 4299
Total fragments: 64390
Proteins after pattern filtering: 2195
Total fragments: 13169
Proteins after MINT filtering: 8
Total fragments: 129
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
13.89
|
-2.31 |
0.00 |
| Best peptides |
HRRPRPRR |
0.00
|
-8.08 |
-5.77 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RSKPLPPQ |
6.90
|
-7.20 |
-4.89 |
|
STPSRPVP |
6.95
|
-8.25 |
-5.94 |
|
SPPPIPKT |
7.26
|
-7.73 |
-5.42 |
| P53933 |
APPPLPNR |
4.29
|
-8.79 |
-6.48 |
|
RRRPPPPP |
4.49
|
-6.24 |
-3.93 |
|
TRRRPPPP |
5.02
|
-6.21 |
-3.90 |
| P53914 |
NVKPLPPK |
5.23
|
-8.02 |
-5.71 |
|
VKPLPPKE |
7.79
|
-6.23 |
-3.92 |
|
LPPIDPKD |
9.58
|
-4.90 |
-2.59 |
| P48562 |
LNPYRPHH |
4.86
|
-7.46 |
-5.15 |
|
QAPKRPDA |
7.21
|
-6.51 |
-4.20 |
|
PRAPYPSN |
7.27
|
-6.86 |
-4.55 |
| Q03497 |
FIPSRPAP |
4.86
|
-7.78 |
-5.47 |
|
KPKVKPSK |
6.16
|
-7.75 |
-5.44 |
|
VKPSKPEA |
6.45
|
-6.82 |
-4.51 |
| Q12469 |
KPFPRPSD |
6.72
|
-6.50 |
-4.19 |
|
ELKPFPRP |
6.94
|
-5.95 |
-3.64 |
|
LKPFPRPS |
8.57
|
-4.15 |
-1.84 |
| P25293 |
TPHNTPAS |
10.28
|
-4.25 |
-1.94 |
| P08018 |
PRRPLSTQ |
5.50
|
-4.79 |
-2.48 |
|
QHPTRPNV |
6.74
|
-7.48 |
-5.17 |
|
RAPRRPLS |
6.78
|
-7.21 |
-4.90 |
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