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Matrix information:
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ADAN-name: NBP2_1SEM-5.PDB
Scoring matrix: NBP2_1SEM-5_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.02
Foldx random average score for Saccharomyces cerevisiae: 17.471 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7178
Total fragments: 1862543
Proteins after disorder filtering: 4550
Total fragments: 103100
Proteins after pattern filtering: 2319
Total fragments: 21621
Proteins after MINT filtering: 8
Total fragments: 185
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
18.02
|
1.24 |
0.00 |
| Best peptides |
LLFRPPRRHF |
0.00
|
-8.96 |
-10.20 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
KRSKPLPPQL |
8.60
|
-2.72 |
-3.96 |
|
TKSASPPASP |
10.35
|
-1.88 |
-3.12 |
|
PSSSPPPIPK |
10.66
|
-1.28 |
-2.52 |
| P53933 |
TRRRPPPPPI |
6.65
|
-5.13 |
-6.37 |
|
RRRPPPPPIP |
8.26
|
-7.89 |
-9.13 |
|
RVAPPPLPNR |
9.10
|
-7.30 |
-8.54 |
| P53914 |
AKNVKPLPPK |
10.29
|
-2.20 |
-3.44 |
|
KNVKPLPPKE |
11.42
|
-1.38 |
-2.62 |
|
LPPIDPKDGG |
11.52
|
-3.55 |
-4.79 |
| P48562 |
PQRTAPKPPI |
8.22
|
-4.44 |
-5.68 |
|
TAPKPPISAP |
8.35
|
-4.37 |
-5.61 |
|
YHHQGPSPSP |
9.03
|
-2.83 |
-4.07 |
| Q03497 |
FIPSRPAPKP |
8.96
|
-4.18 |
-5.42 |
|
HKQHKPKVKP |
9.45
|
-2.48 |
-3.72 |
|
EQPLPPIPPT |
9.92
|
-3.63 |
-4.87 |
| Q12469 |
ELKPFPRPSD |
10.64
|
-3.31 |
-4.55 |
|
RLAPSAPATK |
12.00
|
-3.98 |
-5.22 |
|
LAPSAPATKN |
12.90
|
-3.14 |
-4.38 |
| P25293 |
DNAPTPHNTP |
13.19
|
-1.05 |
-2.29 |
|
TPHNTPASVL |
14.36
|
-4.38 |
-5.62 |
|
PHNTPASVLN |
15.03
|
-2.49 |
-3.73 |
| P08018 |
IVDGPPPRLP |
7.27
|
-4.50 |
-5.74 |
|
PLSTQHPTRP |
10.20
|
-4.10 |
-5.34 |
|
PPPRLPSDKF |
10.42
|
-6.69 |
-7.93 |
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