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Matrix information:
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ADAN-name: NBP2_1SEM-29.PDB
Scoring matrix: NBP2_1SEM-29_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.91
Foldx random average score for Saccharomyces cerevisiae: 14.120 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1320911
Proteins after disorder filtering: 3825
Total fragments: 39551
Proteins after pattern filtering: 1895
Total fragments: 9548
Proteins after MINT filtering: 7
Total fragments: 90
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
20.91
|
-2.44 |
0.00 |
| Best peptides |
HYRFRPPRWH |
0.00
|
-15.02 |
-12.58 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RSKPLPPQLL |
8.18
|
-8.24 |
-5.80 |
|
RYPQTPSYYY |
8.80
|
-9.84 |
-7.40 |
|
ASPSYPSIFR |
9.93
|
-8.55 |
-6.12 |
| P53933 |
APPPLPNRQL |
8.88
|
-9.12 |
-6.68 |
|
RRPPPPPIPS |
10.22
|
-10.32 |
-7.88 |
|
RTRRRPPPPP |
10.57
|
-11.30 |
-8.87 |
| P53914 |
NVKPLPPKED |
8.75
|
-9.33 |
-6.89 |
|
AKNVKPLPPK |
9.94
|
-8.17 |
-5.73 |
|
PLPPKEDDEL |
12.46
|
-6.06 |
-3.62 |
| P48562 |
PYRPHHNMIN |
8.56
|
-10.58 |
-8.14 |
|
LNPYRPHHNM |
9.27
|
-9.83 |
-7.39 |
|
TMRQAPKRPD |
9.57
|
-9.21 |
-6.78 |
| Q03497 |
NGKFIPSRPA |
7.52
|
-9.11 |
-6.67 |
|
KPKVKPSKPE |
8.40
|
-8.44 |
-6.00 |
|
HKQHKPKVKP |
9.12
|
-8.75 |
-6.31 |
| P08018 |
PRRPLSTQHP |
10.49
|
-10.33 |
-7.89 |
|
TQHPTRPNVA |
11.03
|
-6.65 |
-4.21 |
|
QHPTRPNVAP |
11.61
|
-10.42 |
-7.98 |
| Q12469 |
ELKPFPRPSD |
9.53
|
-8.87 |
-6.43 |
|
KPFPRPSDDD |
12.39
|
-8.41 |
-5.97 |
|
PHRLAPSAPA |
13.61
|
-7.63 |
-5.20 |
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