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Matrix information:
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ADAN-name: NBP2_1SEM-14.PDB
Scoring matrix: NBP2_1SEM-14_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 20.9
Foldx random average score for Saccharomyces cerevisiae: 16.331 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1475966
Proteins after disorder filtering: 4165
Total fragments: 46302
Proteins after pattern filtering: 1840
Total fragments: 6187
Proteins after MINT filtering: 8
Total fragments: 60
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
20.90
|
-2.77 |
0.00 |
| Best peptides |
RWHRRFKHM |
0.00
|
-10.45 |
-7.68 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
KRSKPLPPQ |
13.72
|
-7.67 |
-4.90 |
|
FPNLTPNST |
13.92
|
-7.99 |
-5.22 |
|
RYPQTPSYY |
14.07
|
-5.61 |
-2.84 |
| P53933 |
PPPLPNRQL |
11.96
|
-8.29 |
-5.52 |
|
PPPIPSTQK |
12.22
|
-6.52 |
-3.75 |
|
RRRPPPPPI |
14.51
|
-8.05 |
-5.28 |
| P53914 |
KNVKPLPPK |
13.13
|
-7.10 |
-4.33 |
|
LPPIDPKDG |
14.26
|
-7.11 |
-4.34 |
|
VKPLPPKED |
15.92
|
-4.79 |
-2.02 |
| P48562 |
NPYRPHHNM |
9.25
|
-11.04 |
-8.27 |
|
APKRPDADV |
12.74
|
-7.93 |
-5.16 |
|
KPPISAPRA |
12.78
|
-7.25 |
-4.48 |
| Q03497 |
HKPKVKPSK |
12.30
|
-5.86 |
-3.09 |
|
LPPIPPTKS |
12.83
|
-8.01 |
-5.24 |
|
KPSKPEAKS |
13.22
|
-5.88 |
-3.11 |
| Q12469 |
PFPRPSDDD |
15.29
|
-5.16 |
-2.39 |
|
KPFPRPSDD |
15.50
|
-3.76 |
-0.99 |
|
RLAPSAPAT |
16.23
|
-5.70 |
-2.93 |
| P25293 |
PHNTPASVL |
14.93
|
-6.04 |
-3.27 |
|
TPHNTPASV |
15.03
|
-4.34 |
-1.57 |
| P08018 |
RAPRRPLST |
10.37
|
-7.43 |
-4.66 |
|
PPPRLPSDK |
11.42
|
-8.72 |
-5.95 |
|
APRRPLSTQ |
13.17
|
-7.39 |
-4.62 |
|
