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Matrix information:
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ADAN-name: NBP2_1GCQ-8.PDB
Scoring matrix: NBP2_1GCQ-8_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.93
Foldx random average score for Saccharomyces cerevisiae: 12.709 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1309880
Proteins after disorder filtering: 4371
Total fragments: 65660
Proteins after pattern filtering: 2199
Total fragments: 13433
Proteins after MINT filtering: 8
Total fragments: 127
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
15.93
|
-2.52 |
0.00 |
| Best peptides |
HWRPRPPR |
0.00
|
-6.30 |
-3.78 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
STPSRPVP |
8.03
|
-7.75 |
-5.23 |
|
RSKPLPPQ |
8.55
|
-7.50 |
-4.98 |
|
TEPSTPSR |
8.57
|
-6.98 |
-4.46 |
| P53933 |
APPPLPNR |
4.47
|
-9.46 |
-6.94 |
|
RRRPPPPP |
7.04
|
-7.39 |
-4.87 |
|
TRRRPPPP |
7.47
|
-6.22 |
-3.70 |
| P53914 |
NVKPLPPK |
6.72
|
-8.39 |
-5.87 |
|
VKPLPPKE |
10.07
|
-5.96 |
-3.44 |
|
LPPIDPKD |
11.58
|
-4.96 |
-2.44 |
| P48562 |
LNPYRPHH |
7.70
|
-7.01 |
-4.49 |
|
QAPKRPDA |
8.49
|
-6.79 |
-4.27 |
|
PSPLNPYR |
8.80
|
-5.52 |
-3.00 |
| Q03497 |
FIPSRPAP |
5.85
|
-7.72 |
-5.20 |
|
HAPTTPNR |
7.89
|
-7.03 |
-4.51 |
|
KPKVKPSK |
8.13
|
-8.21 |
-5.69 |
| Q12469 |
KPFPRPSD |
8.34
|
-10.05 |
-7.53 |
|
ELKPFPRP |
10.49
|
-6.20 |
-3.68 |
|
LKPFPRPS |
11.18
|
-3.97 |
-1.45 |
| P25293 |
APTPHNTP |
12.37
|
-3.56 |
-1.04 |
| P08018 |
PRRPLSTQ |
7.75
|
-6.39 |
-3.87 |
|
RAPRRPLS |
8.16
|
-6.98 |
-4.46 |
|
QHPTRPNV |
8.20
|
-7.97 |
-5.45 |
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