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Matrix information:
(Help) ADAN-name: NBP2_1GCQ-7.PDB Scoring matrix: NBP2_1GCQ-7_mat Uniprot code: Q12163 Genome source: Saccharomyces cerevisiae Wild-type ligand: AGAAAAAA Foldx wt ligand score: 16.59 Foldx random average score for Saccharomyces cerevisiae: 12.388 Available information for Q12163 in MINT (Nov 2008): Nš of interacting proteins: 10 Proteins belonging to other specie: 0 Nš of interactions described: 20 Interactions with other species: 0
Genome scanning information:
Subcellular location: False Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 7179 Total fragments: 3214721 Proteins after random average filtering: 7179 Total fragments: 1201039 Proteins after disorder filtering: 4318 Total fragments: 54792 Proteins after pattern filtering: 2013 Total fragments: 10859 Proteins after MINT filtering: 7 Total fragments: 117
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAA |
16.59
|
-2.60 |
0.00 |
| Best peptides |
KRKRPRRW |
0.00
|
-7.65 |
-5.05 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
KRSKPLPP |
7.84
|
-6.56 |
-3.96 |
|
KPLPPQLL |
8.53
|
-7.14 |
-4.54 |
|
SPSYPSIF |
9.38
|
-6.43 |
-3.83 |
| P53933 |
RRPPPPPI |
7.60
|
-7.50 |
-4.90 |
|
RRRPPPPP |
8.32
|
-7.91 |
-5.31 |
|
TRRRPPPP |
8.36
|
-8.37 |
-5.77 |
| P53914 |
KPLPPKED |
9.08
|
-5.78 |
-3.18 |
|
KNVKPLPP |
9.60
|
-6.39 |
-3.79 |
|
VKPLPPKE |
9.75
|
-7.98 |
-5.38 |
| P48562 |
QFPRGPMH |
7.20
|
-7.67 |
-5.07 |
|
MRQAPKRP |
7.46
|
-7.27 |
-4.67 |
|
SPLNPYRP |
9.00
|
-5.95 |
-3.35 |
| Q03497 |
IPSRPAPK |
8.08
|
-4.87 |
-2.27 |
|
HKPKVKPS |
8.60
|
-5.44 |
-2.84 |
|
GKFIPSRP |
8.63
|
-7.36 |
-4.76 |
| P08018 |
RAPRRPLS |
8.68
|
-6.58 |
-3.98 |
|
STQHPTRP |
9.32
|
-7.26 |
-4.66 |
|
TRPNVAPH |
9.69
|
-3.70 |
-1.10 |
| Q12469 |
ELKPFPRP |
6.88
|
-6.41 |
-3.81 |
|
LKPFPRPS |
10.02
|
-7.08 |
-4.48 |
|
KPFPRPSD |
10.09
|
-4.49 |
-1.89 |
|