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Matrix information:
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ADAN-name: NBP2_1GCQ-23.PDB
Scoring matrix: NBP2_1GCQ-23_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 20.33
Foldx random average score for Saccharomyces cerevisiae: 16.371 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3221900
Proteins after random average filtering: 7179
Total fragments: 1227189
Proteins after disorder filtering: 4559
Total fragments: 63451
Proteins after pattern filtering: 1998
Total fragments: 9827
Proteins after MINT filtering: 7
Total fragments: 108
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
20.33
|
-2.10 |
0.00 |
| Best peptides |
WRMRRRM |
0.00
|
-12.82 |
-10.72 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
KPLPPQL |
10.62
|
-7.02 |
-4.92 |
|
PSTPSRP |
10.77
|
-6.57 |
-4.47 |
|
TPSRPVP |
11.62
|
-6.83 |
-4.73 |
| P53933 |
PPLPNRQ |
10.06
|
-7.46 |
-5.36 |
|
RRRPPPP |
10.25
|
-7.77 |
-5.67 |
|
RPPPPPI |
12.15
|
-6.82 |
-4.72 |
| P53914 |
KPLPPKE |
11.53
|
-6.78 |
-4.68 |
|
NVKPLPP |
15.23
|
-4.93 |
-2.83 |
| P48562 |
QFPRGPM |
9.71
|
-6.14 |
-4.04 |
|
SAPRAPY |
10.51
|
-5.18 |
-3.08 |
|
NPYRPHH |
10.66
|
-4.88 |
-2.78 |
| Q03497 |
KFIPSRP |
9.40
|
-8.36 |
-6.26 |
|
IPSRPAP |
10.61
|
-5.04 |
-2.94 |
|
QPLPPIP |
11.61
|
-6.98 |
-4.88 |
| P08018 |
RAPRRPL |
7.45
|
-10.41 |
-8.31 |
|
HPTRPNV |
7.47
|
-5.85 |
-3.75 |
|
APRRPLS |
9.01
|
-4.50 |
-2.40 |
| Q12469 |
PFPRPSD |
12.04
|
-3.65 |
-1.55 |
|
LKPFPRP |
12.94
|
-6.01 |
-3.91 |
|
KPFPRPS |
13.73
|
-5.41 |
-3.31 |
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