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Matrix information:
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ADAN-name: NBP2_1GCQ-15.PDB
Scoring matrix: NBP2_1GCQ-15_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 21.77
Foldx random average score for Saccharomyces cerevisiae: 15.647 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1306076
Proteins after disorder filtering: 4013
Total fragments: 42341
Proteins after pattern filtering: 1606
Total fragments: 4694
Proteins after MINT filtering: 8
Total fragments: 56
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
21.77
|
-1.52 |
0.00 |
| Best peptides |
RRWRRHRDR |
0.00
|
-13.05 |
-11.53 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RTEPSTPSR |
10.91
|
-9.20 |
-7.68 |
|
SPSYPSIFR |
11.73
|
-7.03 |
-5.51 |
|
KRSKPLPPQ |
12.50
|
-7.53 |
-6.01 |
| P53933 |
VAPPPLPNR |
12.55
|
-6.60 |
-5.08 |
|
RTRRRPPPP |
14.31
|
-10.18 |
-8.66 |
|
SYPGNPTSR |
14.77
|
-4.07 |
-2.55 |
| P53914 |
KNVKPLPPK |
13.54
|
-6.36 |
-4.84 |
|
PIDPKDGGR |
13.95
|
-3.38 |
-1.86 |
|
LPPIDPKDG |
14.39
|
-5.76 |
-4.24 |
| P48562 |
NPYRPHHNM |
7.53
|
-11.70 |
-10.18 |
|
SPSPLNPYR |
10.88
|
-6.98 |
-5.46 |
|
RQAPKRPDA |
11.82
|
-10.21 |
-8.69 |
| Q03497 |
HKPKVKPSK |
11.11
|
-7.40 |
-5.88 |
|
FPSKNPLKN |
12.40
|
-6.95 |
-5.43 |
|
THAPTTPNR |
12.87
|
-5.08 |
-3.56 |
| Q12469 |
LKPFPRPSD |
13.98
|
-4.39 |
-2.87 |
| P25293 |
NAPTPHNTP |
15.52
|
-6.51 |
-4.99 |
| P08018 |
APRRPLSTQ |
10.32
|
-10.22 |
-8.70 |
|
PPPRLPSDK |
11.53
|
-9.80 |
-8.28 |
|
HPTRPNVAP |
11.73
|
-10.90 |
-9.38 |
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