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Matrix information:
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ADAN-name: NBP2_1GCQ-11.PDB
Scoring matrix: NBP2_1GCQ-11_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 15.97
Foldx random average score for Saccharomyces cerevisiae: 12.522 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3221900
Proteins after random average filtering: 7179
Total fragments: 1371706
Proteins after disorder filtering: 4619
Total fragments: 84323
Proteins after pattern filtering: 2176
Total fragments: 12373
Proteins after MINT filtering: 8
Total fragments: 119
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
15.97
|
-1.73 |
0.00 |
| Best peptides |
RRKRHPH |
0.00
|
-7.19 |
-5.46 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
TPSRPVP |
7.95
|
-5.24 |
-3.51 |
|
APKPPAN |
8.45
|
-5.27 |
-3.54 |
|
FPNLTPN |
8.47
|
-5.83 |
-4.10 |
| P53933 |
RRPPPPP |
5.10
|
-7.19 |
-5.46 |
|
RRRPPPP |
5.24
|
-7.27 |
-5.54 |
|
RPPPPPI |
6.40
|
-9.30 |
-7.57 |
| P53914 |
VKPLPPK |
9.03
|
-6.13 |
-4.40 |
|
KPLPPKE |
9.83
|
-5.46 |
-3.73 |
|
NVKPLPP |
10.48
|
-5.06 |
-3.33 |
| P48562 |
NPYRPHH |
4.58
|
-9.32 |
-7.59 |
|
RGPMHPN |
6.26
|
-5.29 |
-3.56 |
|
FPRGPMH |
7.60
|
-5.57 |
-3.84 |
| Q03497 |
FPSKNPL |
6.76
|
-5.64 |
-3.91 |
|
IPSRPAP |
6.96
|
-8.93 |
-7.20 |
|
RPAPKPP |
8.34
|
-5.60 |
-3.87 |
| Q12469 |
PFPRPSD |
9.68
|
-4.17 |
-2.44 |
|
LKPFPRP |
9.78
|
-6.22 |
-4.49 |
|
KPFPRPS |
10.34
|
-4.85 |
-3.12 |
| P25293 |
PTPHNTP |
10.16
|
-4.38 |
-2.65 |
|
PHNTPAS |
12.14
|
-3.56 |
-1.83 |
|
TPHNTPA |
12.46
|
-3.00 |
-1.27 |
| P08018 |
RAPRRPL |
5.62
|
-7.72 |
-5.99 |
|
RPNVAPH |
7.18
|
-5.40 |
-3.67 |
|
HPTRPNV |
7.62
|
-8.41 |
-6.68 |
|
