ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-8.PDB
Scoring matrix: MYO5_1ZUY-8_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 10.2
Foldx random average score for Saccharomyces cerevisiae: 8.319

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1646266
Proteins after disorder filtering: 4606
 Total fragments: 86074
Proteins after pattern filtering: 2212
 Total fragments: 10746
Proteins after MINT filtering: 45
 Total fragments: 560

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

10.20

0.04

0.00

Best peptides

RKMPLMDW

0.00

-0.61

-0.65

         
Interactors      
P53145

PNEPLLPP

3.93

-3.95

-3.99

EPLLPPLP

6.38

-3.58

-3.62

PLLPPLPG

6.63

-2.61

-2.65

P39113

PRRPQKNR

4.87

-2.45

-2.49

HRGPRRPQ

5.71

-2.24

-2.28

AMSPLGAP

5.85

-2.44

-2.48

P40073

YPQQQPSH

6.67

-2.76

-2.80

P25604

PKSPHLKP

5.09

-1.74

-1.78

PPLPPPPP

5.47

-3.96

-4.00

PPKPKSPH

5.53

-1.14

-1.18

P25623

KPLPVEPA

6.57

-1.53

-1.57

PPLQPQSK

7.20

-1.35

-1.39

SDTPPLPP

7.43

-0.68

-0.72

Q05933

PGFPLNNV

6.34

-1.57

-1.61

PVDPNTDR

6.80

-0.31

-0.35

FRGPAYPS

7.76

-0.50

-0.54

P53094

YPLKLPPL

3.95

-4.26

-4.30

LKLPPLPL

5.00

-1.70

-1.74

LNVPLPPQ

5.28

-3.50

-3.54

Q12451

HLLPWLPP

5.20

-3.56

-3.60

APKHAPPP

6.47

-3.20

-3.24

QPHLLPWL

6.53

-2.11

-2.15

P15891

KKEPVKTP

5.19

-3.16

-3.20

TPEKKPKE

5.39

-3.66

-3.70

VKTPSPAP

5.55

-1.73

-1.77

P48562

SPSPLNPY

4.22

-2.93

-2.97

PLNPYRPH

5.57

-0.78

-0.82

GQFPRGPM

5.60

-1.36

-1.40

P40341

SRNIPPPP

5.03

-3.06

-3.10

PPLNDPSN

6.96

-2.03

-2.07

RNIPPPPP

7.14

-2.80

-2.84

Q08912

PKGPPPPP

6.00

-2.73

-2.77

HPKGPPPP

6.45

-3.28

-3.32

CYTPSWGP

7.24

-0.96

-1.00

P17555

PPRPKKPS

6.25

-1.71

-1.75

APAPPPPP

6.29

-3.73

-3.77

PKKPSTLK

6.67

-0.47

-0.51

Q12342

AKAPPPPP

5.41

-3.70

-3.74

KAKAPPPP

6.86

-3.50

-3.54

P47068

PPLPRAPP

5.41

-3.24

-3.28

LPEPISPE

5.68

-2.20

-2.24

DPSSNPFF

5.74

-1.95

-1.99

P38822

APEVPPPR

4.80

-3.90

-3.94

PEVPPPRR

6.80

-1.75

-1.79

TPTTTPGS

7.56

-1.98

-2.02

P04050

TCLPVPPP

6.16

-3.80

-3.84

PVRPSISF

6.43

-1.25

-1.29

SPAYSPKQ

6.94

-2.18

-2.22

P40450

PQLPPPPP

5.37

-3.24

-3.28

PPLPDLFK

5.61

-2.31

-2.35

LPQLPPPP

6.36

-3.94

-3.98

P40453

RKRPPPPP

4.61

-3.14

-3.18

PDLPIRLR

5.48

-1.20

-1.24

LRKRPPPP

5.74

-3.32

-3.36

Q12168

DPYFPQFR

6.13

-1.70

-1.74

HPVPKPNI

6.25

-3.01

-3.05

NDDPYFPQ

6.34

-1.49

-1.53

P41832

SPAPPPPP

6.43

-3.76

-3.80

PPAPPMMP

6.44

-2.92

-2.96

KGETPPPP

7.26

-3.14

-3.18

P36006

PKDPKFEA

5.05

-1.19

-1.23

NKKPKNPG

5.43

-2.30

-2.34

ANIPIPPP

6.31

-2.91

-2.95

P38753

YPSNLPIQ

5.99

-3.79

-3.83

SNLPIQHP

6.13

-2.43

-2.47

NNTPVMPP

6.16

-1.58

-1.62

P38237

DPFVPPPN

6.21

-2.45

-2.49

DLNDPFVP

6.70

-1.88

-1.92

FQIPSKPE

6.86

-0.46

-0.50

P34245

GPWPGPAE

7.05

-1.68

-1.72

AYSTPFGP

7.51

-1.77

-1.81

PFGPWPGP

7.54

-2.09

-2.13

Q01389

RSKPLPPQ

5.37

-3.29

-3.33

SQFPNLTP

5.76

-1.73

-1.77

PQTPSYYY

5.83

0.36

0.32

Q03306

PPLPQMEF

4.20

-4.68

-4.72

YRQPTPSP

4.42

-3.10

-3.14

GRLPNSAP

5.64

-2.23

-2.27

P34758

QPQHLPPP

3.93

-5.54

-5.58

QQLPLEPL

4.50

-1.92

-1.96

VPQQLPLE

4.90

-3.44

-3.48

P53933

RRRPPPPP

4.89

-3.52

-3.56

TRRRPPPP

5.61

-3.10

-3.14

NDLPMELP

6.09

-2.28

-2.32

P32381

LTEPPMNP

8.00

-2.03

-2.07

Q00453

APIPLPHQ

4.68

-3.72

-3.76

PYFPHPMP

5.45

-2.36

-2.40

IPLPHQPP

5.54

-2.61

-2.65

P40021

PPLPPPLF

4.55

-3.68

-3.72

PPLPPPAR

4.65

-3.51

-3.55

VLNSPPLP

6.34

-2.75

-2.79

P36150

VVNPSSPS

7.48

1.10

1.06

Q04439

PKEPMFEA

4.29

-3.38

-3.42

SKKPAPPP

5.28

-3.05

-3.09

QANIPPPP

6.13

-3.07

-3.11

Q12446

QFAPLPDP

4.77

-4.05

-4.09

VRLPAPPP

5.00

-3.43

-3.47

HKAPPPPP

5.30

-3.56

-3.60

Q01560

PPEPQPYY

5.14

-3.80

-3.84

EPQPYYPP

5.18

-3.24

-3.28

QPYYPPPP

5.96

-3.32

-3.36

P00950

SFDVPPPP

7.27

-2.39

-2.43

FDVPPPPI

8.02

-1.21

-1.25

P53735

PKLVPPPP

5.02

-3.21

-3.25

KLVPPPPR

5.57

-3.77

-3.81

APKLVPPP

5.82

-3.79

-3.83

P33334

SKMPTRFP

4.59

-2.84

-2.88

GPKFEPLY

5.67

-2.55

-2.59

LALPPPPP

6.02

-3.84

-3.88

P40523

TPLPTPVP

5.39

-3.40

-3.44

NITPLPTP

5.88

-2.44

-2.48

PPLAPPPH

5.99

-2.37

-2.41

P40563

RRAPPPVP

6.36

-3.22

-3.26

NPGQLPPS

6.64

-2.89

-2.93

PPVPKKPS

7.15

-2.39

-2.43

Q08989

PKGPPPPP

6.00

-2.73

-2.77

HPKGPPPP

6.45

-3.28

-3.32

NGDHPKGP

8.23

-1.17

-1.21

P37370

SQMPKPRP

4.19

-4.14

-4.18

SKNPTKSP

4.27

-1.60

-1.64

PLAPLPPP

4.39

-4.93

-4.97

P39743

YSNPLTSP

6.66

-1.62

-1.66

NPLTSPVA

7.33

-1.42

-1.46

Q03900

LPNTPSGA

7.63

-0.26

-0.30

 


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