ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-7.PDB
Scoring matrix: MYO5_1ZUY-7_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 11.33
Foldx random average score for Saccharomyces cerevisiae: 9.087

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1339655
Proteins after disorder filtering: 4481
 Total fragments: 58458
Proteins after pattern filtering: 2114
 Total fragments: 11379
Proteins after MINT filtering: 44
 Total fragments: 811

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAA

11.33

2.54

0.00

Best peptides

KRPRWPWR

0.00

-2.14

-4.68

         
Interactors      
P53145

LPGQPPLI

5.29

-3.32

-5.86

LLPPLPGQ

7.08

-1.83

-4.37

LPPLPGQP

7.51

-4.42

-6.96

P39113

RGPRRPQK

5.55

-2.70

-5.24

APPPPPHK

6.00

-2.60

-5.14

GPRRPQKN

6.64

-2.88

-5.42

P40073

PQQQPSHT

8.35

-1.13

-3.67

YPQQQPSH

8.44

-0.08

-2.62

P25604

KPKSPHLK

5.75

-2.40

-4.94

LPPPPPPQ

5.81

-3.44

-5.98

KPPLPPPP

6.32

-4.94

-7.48

P25623

TPPLPPHA

6.08

-1.74

-4.28

KPLPVEPA

6.71

-0.82

-3.36

QPPLQPQS

6.87

-1.77

-4.31

Q05933

TPGFPLNN

7.67

-1.05

-3.59

FRGPAYPS

7.94

0.39

-2.15

LPGTPGFP

8.16

-5.19

-7.73

P53094

KLPPLPLT

4.58

-2.78

-5.32

FPQSPIRA

6.50

-1.26

-3.80

LPPLPLTS

6.77

-3.35

-5.89

Q12451

QPHLLPWL

4.39

-3.21

-5.75

LLPWLPPT

6.70

-1.93

-4.47

LPWLPPTD

6.91

-2.55

-5.09

P15891

QPPLPSRN

4.44

-3.89

-6.43

APPPPPRR

4.82

-3.80

-6.34

PPPPPRRA

5.18

-2.82

-5.36

P48562

KPPISAPR

4.83

-2.34

-4.88

MRQAPKRP

5.84

-4.02

-6.56

KQPQSPLS

5.85

-1.19

-3.73

P40341

PPPKPPLN

5.44

-4.10

-6.64

PPPPPPPK

6.49

-2.77

-5.31

KPPLNDPS

6.95

-1.81

-4.35

Q08912

PPPPPPDE

6.88

-1.67

-4.21

PPPPPPPD

6.89

-1.98

-4.52

PPPPPDEK

7.18

-1.38

-3.92

P17555

KSGPPPRP

6.44

-4.10

-6.64

RPKKPSTL

6.54

-2.67

-5.21

APPPPPPA

6.54

-2.75

-5.29

Q12342

KAPPPPPP

7.58

-3.68

-6.22

TPSTPSDG

8.29

0.50

-2.04

PPPPPPPP

8.57

-3.49

-6.03

P47068

TAPPLPRA

6.77

-1.27

-3.81

PPHVPSLT

6.79

-2.43

-4.97

APSPPPHQ

6.82

-2.92

-5.46

P38822

PEVPPPRR

6.09

-2.97

-5.51

APEVPPPR

6.89

-3.16

-5.70

P04050

PPVRPSIS

6.36

-2.73

-5.27

LPVPPPPV

6.44

-3.20

-5.74

PVPPPPVR

7.18

-2.35

-4.89

P40450

PPPLPDLF

6.32

-2.78

-5.32

SPKLFPRL

6.54

-2.29

-4.83

KLPQLPPP

6.74

-3.33

-5.87

P40453

RPPPPPPV

5.36

-2.70

-5.24

KPPDLPIR

5.45

-1.99

-4.53

KRPPPPPP

5.49

-3.98

-6.52

Q12168

PPPLPPRA

4.69

-3.68

-6.22

DPYFPQFR

6.90

-2.70

-5.24

HPVPKPNI

7.18

-0.56

-3.10

P41832

PPPPPPMA

5.53

-3.41

-5.95

PPPPMALF

6.37

-2.10

-4.64

PPPPPPPM

6.71

-2.35

-4.89

P36006

PPPPPPMG

5.79

-3.41

-5.95

KKPKNPGG

6.95

-1.81

-4.35

KPKNPGGL

7.24

-1.89

-4.43

P38753

TPVMPPQR

6.56

-2.41

-4.95

PVMPPQRQ

7.11

-2.72

-5.26

YPSNLPIQ

7.33

-2.19

-4.73

P38237

PPNVPKKD

7.23

-1.93

-4.47

PPPNVPKK

7.88

-0.97

-3.51

DPFVPPPN

7.90

-1.99

-4.53

P34245

FGPWPGPA

7.50

-0.83

-3.37

YSTPFGPW

8.58

-0.62

-3.16

Q01389

KPLPPQLL

5.00

-2.71

-5.25

KRSKPLPP

5.89

-3.78

-6.32

SRPVPPDS

6.36

-1.85

-4.39

Q03306

KPNVPPLQ

4.57

-3.50

-6.04

KPFRIPSS

5.24

-1.99

-4.53

PPKVPVIN

6.97

-3.03

-5.57

P34758

PPPPPPRA

4.86

-3.23

-5.77

LPPPPPPR

5.20

-3.65

-6.19

QPNKPNYG

5.78

-3.33

-5.87

P53933

RRPPPPPI

4.36

-2.59

-5.13

PPPLPNRQ

5.79

-3.04

-5.58

RRRPPPPP

6.25

-3.93

-6.47

P32381

TEPPMNPL

8.65

0.01

-2.53

Q00453

QPPPLPIY

5.70

-2.09

-4.63

LPHQPPPL

5.74

-2.67

-5.21

FPHPMPSA

6.46

-1.10

-3.64

P40021

PLPPPARS

5.90

-2.86

-5.40

PPLPPPLF

6.46

-2.34

-4.88

LPSTPSQM

6.68

-0.84

-3.38

Q04439

KPAPPPPG

5.10

-3.23

-5.77

KPKEPMFE

5.45

-3.18

-5.72

RPSPPTAA

6.57

-1.65

-4.19

Q12446

APPPPPRR

4.82

-3.80

-6.34

APPPPPRA

4.94

-3.45

-5.99

LPQLPNRN

5.00

-2.68

-5.22

Q01560

QPPEPQPY

6.97

-1.47

-4.01

YPPPPPGE

7.21

-1.34

-3.88

YYPPPPPG

7.22

-2.20

-4.74

P00950

FDVPPPPI

7.75

-1.54

-4.08

DVPPPPID

7.84

-0.90

-3.44

VPPPPIDA

7.88

-1.58

-4.12

P53735

KLVPPPPR

4.99

-3.38

-5.92

LVPPPPRT

5.08

-3.43

-5.97

PPPPRTRS

6.98

-1.49

-4.03

P33334

MPTRFPPA

4.55

-4.01

-6.55

LPPPPPGF

6.39

-2.62

-5.16

PPPPPGLD

6.53

-2.37

-4.91

P40523

PLAPPPHG

6.71

-2.58

-5.12

PVGVPPLA

7.15

-2.33

-4.87

PPLAPPPH

7.97

-1.96

-4.50

P40563

PSERPKRR

5.62

-3.01

-5.55

RRAPPPVP

6.40

-3.75

-6.29

RAPPPVPK

6.59

-1.75

-4.29

Q08989

PPPPPPDE

6.88

-1.67

-4.21

PPPPPPPD

6.89

-1.98

-4.52

PPPPPDEK

7.18

-1.38

-3.92

P37370

RPHMPSVR

4.89

-3.73

-6.27

MPKPRPFQ

5.23

-4.55

-7.09

QMPKPRPF

5.27

-2.99

-5.53

P39743

NPLTSPVA

8.71

0.49

-2.05

Q03900

LPNTPSGA

7.57

-1.01

-3.55

PSGAPKLK

8.37

-1.66

-4.20

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER