ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-29.PDB
Scoring matrix: MYO5_1ZUY-29_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.84
Foldx random average score for Saccharomyces cerevisiae: 14.372

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1313549
Proteins after disorder filtering: 3954
 Total fragments: 42645
Proteins after pattern filtering: 1998
 Total fragments: 10683
Proteins after MINT filtering: 44
 Total fragments: 679

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

19.84

-0.49

0.00

Best peptides

RRMPLPFRWH

0.00

-7.15

-6.66

         
Interactors      
P53145

PLPGQPPLIN

9.93

-6.92

-6.43

NEPLLPPLPG

10.42

-6.73

-6.24

LLPPLPGQPP

11.15

-6.28

-5.79

P39113

PRRPQKNRYN

6.70

-7.37

-6.88

RGPRRPQKNR

10.55

-4.82

-4.33

ASHRGPRRPQ

10.84

-3.87

-3.38

P40073

GYPQQQPSHT

12.79

-2.89

-2.40

P25604

NTPPLPPKPK

6.70

-7.02

-6.53

QAPSLPPKPN

8.19

-6.19

-5.70

LKPPLPPPPP

10.10

-7.21

-6.72

P25623

DTPPLPPHAT

10.22

-5.71

-5.22

KTKPLPVEPA

11.23

-5.86

-5.37

PLPPHATPKN

12.46

-3.54

-3.05

Q05933

TLPGTPGFPL

10.51

-7.33

-6.84

TKFRGPAYPS

12.04

-6.78

-6.29

GTPGFPLNNV

13.06

-4.25

-3.76

P53094

YPLKLPPLPL

10.34

-7.60

-7.11

CYPLKLPPLP

10.75

-5.92

-5.43

AFPQSPIRAY

10.91

-3.18

-2.69

Q12451

LLPWLPPTDT

11.87

-5.04

-4.55

QPHLLPWLPP

12.64

-6.55

-6.06

HLLPWLPPTD

12.65

-5.09

-4.60

P15891

AQPPLPSRNV

6.44

-5.99

-5.50

AAPPPPPRRA

7.43

-4.75

-4.26

PRRATPEKKP

9.37

-6.54

-6.05

P48562

PSPLNPYRPH

7.93

-5.10

-4.61

TMRQAPKRPD

8.62

-5.69

-5.20

PYRPHHNMIN

9.38

-4.81

-4.32

P40341

PPPPPPPKPP

10.90

-5.66

-5.17

NIPPPPPPPP

11.99

-6.37

-5.88

PPPPKPPLND

12.09

-5.44

-4.95

Q08912

PPPPPDEKDR

13.46

-2.18

-1.69

KGPPPPPPPD

13.60

-4.34

-3.85

PPPPPPDEKD

14.14

-3.73

-3.24

P17555

SKSGPPPRPK

8.84

-5.06

-4.57

GPPPRPKKPS

9.22

-5.25

-4.76

PRPKKPSTLK

9.44

-6.52

-6.03

Q12342

KAPPPPPPPP

13.93

-5.34

-4.85

APPPPPPPPP

14.06

-5.12

-4.63

RKAKAPPPPP

14.31

-5.76

-5.27

P47068

DPSSNPFFRK

10.34

-5.99

-5.50

KYYVPPGIPT

11.11

-7.07

-6.58

KVPPHPVPSA

11.28

-4.42

-3.93

P38822

APEVPPPRRS

8.81

-4.31

-3.82

PAPEVPPPRR

11.43

-5.61

-5.12

DRGPAPEVPP

14.09

-5.43

-4.94

P04050

PVPPPPVRPS

7.56

-5.08

-4.59

TCLPVPPPPV

11.98

-7.11

-6.62

GSPAYSPKQD

12.35

-2.82

-2.33

P40450

SSPKLFPRLS

6.74

-5.89

-5.40

APPPLPDLFK

10.05

-6.21

-5.72

KLPQLPPPPP

10.67

-7.02

-6.53

P40453

KPPDLPIRLR

5.35

-6.75

-6.26

PDLPIRLRKR

9.35

-6.00

-5.51

WKPPDLPIRL

10.37

-6.12

-5.63

Q12168

GPPPLPPRAN

7.23

-4.97

-4.48

IPPPVPNRPG

8.04

-5.16

-4.67

DDPYFPQFRS

8.51

-5.72

-5.23

P41832

VIPPAPPMMP

9.36

-8.08

-7.59

PPPPLPSVLS

10.72

-6.50

-6.01

ETPPPPPLPS

11.46

-6.18

-5.69

P36006

PIPPPPPPMG

10.58

-7.57

-7.08

KKPKNPGGLS

11.18

-5.64

-5.15

MGQPKDPKFE

11.87

-2.88

-2.39

P38753

NTPVMPPQRQ

9.65

-6.42

-5.93

PYPSNLPIQH

9.97

-3.85

-3.36

TPVMPPQRQS

10.65

-4.54

-4.05

P38237

ENFQIPSKPE

10.02

-7.68

-7.19

VPPPNVPKKD

10.65

-5.09

-4.60

QIPSKPENTV

11.85

-4.49

-4.00

P34245

AYSTPFGPWP

12.87

-3.45

-2.96

PWPGPAECLW

14.00

-4.42

-3.93

Q01389

TEPSTPSRPV

8.94

-4.71

-4.22

RYPQTPSYYY

9.58

-4.53

-4.04

SKPLPPQLLS

10.76

-6.52

-6.03

Q03306

VGEEKPFRIP

9.45

-5.04

-4.55

YRQPTPSPPL

11.24

-6.70

-6.21

PSPPLPQMEF

11.48

-5.20

-4.71

P34758

DIHSQPNKPN

8.73

-5.15

-4.66

QLPLEPLKPT

9.00

-6.71

-6.22

LPPPPPPRAQ

9.48

-4.08

-3.59

P53933

APPPLPNRQL

6.81

-5.75

-5.26

RRPPPPPIPS

9.33

-6.63

-6.14

KRVAPPPLPN

10.74

-6.89

-6.40

P32381

ILLTEPPMNP

11.96

-7.74

-7.25

Q00453

SLYAPPYFPH

10.26

-6.48

-5.99

DTPASPSKVQ

10.70

-3.20

-2.71

PYFPHPMPSA

10.74

-3.81

-3.32

P40021

PPLPPPARSQ

9.72

-4.69

-4.20

PPPPLPPPLF

9.93

-6.87

-6.38

NYVISPNLPT

11.45

-6.92

-6.43

P36150

PIVVNPSSPS

12.76

-5.75

-5.26

Q04439

NIPTPPQNRD

11.16

-4.99

-4.50

PPPPPSSKPK

11.33

-3.45

-2.96

SKPKEPMFEA

11.72

-6.02

-5.53

Q12446

PLPQLPNRNN

6.90

-5.93

-5.44

PAPPPPPRRG

7.54

-4.46

-3.97

APPPPPHRHV

8.68

-3.09

-2.60

Q01560

HQPPEPQPYY

11.72

-4.91

-4.42

YYPPPPPGEH

12.22

-2.86

-2.37

PYYPPPPPGE

12.79

-5.27

-4.78

P00950

RSFDVPPPPI

13.52

-6.46

-5.97

P53735

KLVPPPPRTR

8.32

-5.80

-5.31

PKLVPPPPRT

11.07

-5.97

-5.48

LVPPPPRTRS

11.45

-4.82

-4.33

P33334

FLPPPPPPPS

11.45

-6.19

-5.70

FDPSLNPIPH

11.68

-4.33

-3.84

TLPPPPPPPG

11.73

-5.90

-5.41

P40523

GVPPLAPPPH

11.15

-5.07

-4.58

APPPHGPFST

13.13

-2.87

-2.38

NITPLPTPVP

13.61

-4.49

-4.00

P40563

APPPVPKKPS

9.49

-6.07

-5.58

KRRAPPPVPK

11.11

-6.15

-5.66

RRAPPPVPKK

11.84

-5.54

-5.05

Q08989

PPPPPDEKGR

13.20

-2.74

-2.25

GPPPPPPPPD

13.31

-4.71

-4.22

PPPPPPDEKG

14.16

-3.95

-3.46

P37370

NRPHMPSVRP

8.78

-6.21

-5.72

AAPPLPTFSA

10.42

-5.88

-5.39

SQMPKPRPFQ

10.53

-6.77

-6.28

Q03900

NTPSGAPKLK

11.16

-4.77

-4.28

 


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