ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-23.PDB
Scoring matrix: MYO5_1ZUY-23_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.18
Foldx random average score for Saccharomyces cerevisiae: 9.467

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1460146
Proteins after disorder filtering: 4541
 Total fragments: 54619
Proteins after pattern filtering: 1916
 Total fragments: 6648
Proteins after MINT filtering: 39
 Total fragments: 340

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

12.18

-1.19

0.00

Best peptides

RPLHPWH

0.00

-5.46

-4.27

         
Interactors      
P53145

EPLLPPL

5.39

-4.57

-3.38

LPPLPGQ

7.20

-4.53

-3.34

NEPLLPP

8.20

-3.83

-2.64

P39113

RGPRRPQ

6.28

-4.24

-3.05

GPRRPQK

7.65

-3.37

-2.18

MSPLGAP

8.16

-4.44

-3.25

P40073

PQQQPSH

8.12

-3.07

-1.88

YPQQQPS

8.79

-2.33

-1.14

P25604

KSPHLKP

6.13

-3.80

-2.61

PHLKPPL

6.24

-4.59

-3.40

KPPLPPP

6.25

-5.07

-3.88

P25623

TPPLPPH

6.29

-3.15

-1.96

QPPLQPQ

7.30

-4.04

-2.85

PPLQPQS

7.58

-3.66

-2.47

Q05933

RGPAYPS

9.34

-3.01

-1.82

P38822

APEVPPP

8.42

-2.11

-0.92

Q12451

PHLLPWL

3.76

-6.33

-5.14

APKHAPP

7.25

-3.62

-2.43

LPWLPPT

7.95

-3.96

-2.77

P15891

QPPLPSR

6.61

-4.69

-3.50

KPEVPED

6.99

-3.13

-1.94

PEKKPKE

7.60

-3.12

-1.93

P48562

NPYRPHH

5.92

-2.49

-1.30

SPLNPYR

6.36

-5.37

-4.18

RGPMHPN

6.85

-4.54

-3.35

P40341

KPPLNDP

7.24

-4.73

-3.54

PPPKPPL

7.64

-3.33

-2.14

PPLNDPS

8.11

-4.42

-3.23

P17555

PPPRPKK

6.44

-4.20

-3.01

RPKKPST

6.63

-3.89

-2.70

PRPKKPS

9.37

-3.26

-2.07

P47068

PPHVPSL

7.63

-3.10

-1.91

LPPHVPS

7.86

-3.36

-2.17

IPPVPPT

7.93

-3.30

-2.11

P04050

PPVRPSI

8.23

-3.06

-1.87

CLPVPPP

8.24

-2.41

-1.22

PPPVRPS

8.51

-2.70

-1.51

P40450

PKLFPRL

6.28

-5.16

-3.97

PPPLPDL

7.16

-4.21

-3.02

SPKLFPR

7.17

-4.55

-3.36

P40453

PPPLPPK

6.68

-4.99

-3.80

PPPVSMP

6.93

-3.88

-2.69

PPDLPIR

7.18

-4.57

-3.38

Q12168

PPPLPPR

6.61

-4.93

-3.74

QHPVPKP

7.19

-3.85

-2.66

PPPVPNR

7.29

-3.88

-2.69

P41832

PPMMPAS

7.10

-4.93

-3.74

PPPVPAK

7.26

-3.70

-2.51

IPPAPPM

8.04

-3.05

-1.86

P36006

QPKDPKF

7.57

-3.40

-2.21

PPPMGQP

7.80

-4.79

-3.60

NIPIPPP

7.92

-2.52

-1.33

P38753

TPVMPPQ

7.54

-4.37

-3.18

NLPIQHP

7.62

-3.41

-2.22

LPIQHPT

7.67

-3.65

-2.46

P38237

PPNVPKK

6.97

-4.80

-3.61

PPPNVPK

8.32

-4.10

-2.91

IPSKPEN

8.40

-2.81

-1.62

P34245

TPFGPWP

9.03

-1.87

-0.68

FGPWPGP

9.10

-0.79

0.40

Q01389

PPPIPKT

7.25

-2.99

-1.80

YPQTPSY

7.41

-2.93

-1.74

SKPLPPQ

7.91

-3.53

-2.34

Q03306

KPNVPPL

6.67

-4.43

-3.24

SPPLPQM

7.46

-2.95

-1.76

PPKVPVI

7.63

-3.09

-1.90

P34758

LPLEPLK

5.82

-5.68

-4.49

QPQHLPP

7.39

-3.90

-2.71

QPLKPTA

7.41

-3.90

-2.71

P53933

LPMELPH

6.40

-4.28

-3.09

PPPLPNR

7.04

-5.08

-3.89

PPPIPST

8.02

-2.96

-1.77

P32381

EPPMNPL

7.57

-3.43

-2.24

Q00453

YFPHPMP

4.72

-4.35

-3.16

PPPLPIY

5.86

-5.23

-4.04

PIPLPHQ

6.78

-3.69

-2.50

P40021

PPPLPPP

7.27

-4.66

-3.47

PPNHPHS

7.39

-3.52

-2.33

HPPNHPH

7.63

-2.38

-1.19

Q04439

KPKEPMF

6.22

-3.10

-1.91

KKPAPPP

8.24

-3.47

-2.28

SKPKEPM

8.48

-2.62

-1.43

Q12446

LPPLPNQ

7.19

-5.09

-3.90

PFPIPEI

7.19

-4.02

-2.83

LPQLPNR

7.24

-4.46

-3.27

Q01560

PEPQPYY

7.09

-4.57

-3.38

QEPQVPQ

8.50

-2.68

-1.49

PSNAPIY

8.65

-4.07

-2.88

P53735

PKLVPPP

5.94

-4.52

-3.33

APKLVPP

7.75

-4.29

-3.10

P33334

PSLNPIP

6.87

-4.97

-3.78

PKFEPLY

7.58

-4.28

-3.09

MPTRFPP

7.84

-4.14

-2.95

P40523

PPLAPPP

7.22

-4.55

-3.36

PPPHGPF

7.67

-2.91

-1.72

PGTVPNM

8.19

-3.30

-2.11

P40563

TPKVPER

6.37

-4.39

-3.20

PPPVPKK

6.41

-4.09

-2.90

PSERPKR

7.06

-3.39

-2.20

P53094

YPLKLPP

5.27

-5.17

-3.98

PLKLPPL

6.78

-4.57

-3.38

REPNEPP

7.25

-4.44

-3.25

P37370

RPHMPSV

6.46

-4.68

-3.49

IPLAPLP

6.65

-5.07

-3.88

PSINPPK

6.79

-4.73

-3.54

P39743

NPLTSPV

8.94

-2.57

-1.38

SNPLTSP

9.43

-3.97

-2.78

 


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