ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-21.PDB
Scoring matrix: MYO5_1ZUY-21_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 17.76
Foldx random average score for Saccharomyces cerevisiae: 15.853

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1839870
Proteins after disorder filtering: 4421
 Total fragments: 66415
Proteins after pattern filtering: 1610
 Total fragments: 3693
Proteins after MINT filtering: 34
 Total fragments: 165

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

17.76

-0.02

0.00

Best peptides

EHKIGRPTRK

0.00

-2.61

-2.59

         
Interactors      
P39113

HRGPRRPQKN

11.82

-1.00

-0.98

PRRPQKNRYN

13.40

-2.54

-2.52

PPPPHKDHLC

14.96

-2.58

-2.56

P40073

GYPQQQPSHT

14.70

-2.25

-2.23

P25604

PPKPKSPHLK

8.46

-3.51

-3.49

PPQPASNALD

14.71

-3.60

-3.58

PPKPNTQLQQ

15.20

-2.09

-2.07

P25623

SQPPLQPQSK

13.46

-2.24

-2.22

QPPLQPQSKT

14.01

-4.50

-4.48

PVEPASPSIS

15.32

-2.79

-2.77

Q05933

TFPVDPNTDR

14.83

-2.11

-2.09

FRGPAYPSNS

15.13

-1.24

-1.22

STFPVDPNTD

15.48

-2.71

-2.69

P15891

DEPEGEPDVK

10.59

-0.44

-0.42

TPSPAPAAKI

15.70

-3.41

-3.39

ATPEKKPKEN

15.78

-0.01

0.01

P48562

PYRPHHNMIN

12.50

-5.28

-5.26

RQAPKRPDAD

14.10

-1.34

-1.32

PLNPYRPHHN

15.35

-1.55

-1.53

P40341

LNDPSNPVSK

12.38

-2.78

-2.76

Q08912

PPPPDEKDRG

15.27

-2.33

-2.31

P17555

PKKPSTLKTK

9.00

-3.33

-3.31

PRPKKPSTLK

9.89

-3.39

-3.37

PPRPKKPSTL

14.07

-2.16

-2.14

P47068

PEPISPETKK

9.01

-4.32

-4.30

LPEPISPETK

11.77

-1.64

-1.62

DPSSNPFFRK

13.41

-1.07

-1.05

P04050

GFSPTSPTYS

12.26

-3.26

-3.24

GYSPGSPAYS

13.11

-3.05

-3.03

GEAPTSPGFG

14.07

-3.10

-3.08

P40450

PPLPDLFKTK

11.00

-2.68

-2.66

SSPKLFPRLS

13.04

-2.75

-2.73

PPLPESLSMN

14.23

-4.73

-4.71

P40453

TKVPEPPSWK

10.87

-4.55

-4.53

PDLPIRLRKR

10.91

-3.01

-2.99

WKPPDLPIRL

13.38

-3.41

-3.39

Q12168

NDDPYFPQFR

11.59

-2.12

-2.10

PNRPGGTTNR

11.78

-2.55

-2.53

PPVPNRPGGT

14.79

-1.34

-1.32

P36006

PKNPGGLSGK

11.23

-1.91

-1.89

MGQPKDPKFE

12.07

-2.74

-2.72

NKKPKNPGGL

13.79

-1.36

-1.34

P38753

NLPIQHPTNS

13.57

-3.82

-3.80

NTPVMPPQRQ

14.52

-2.39

-2.37

LPIQHPTNSA

15.70

-1.29

-1.27

P38237

FQIPSKPENT

14.05

-0.92

-0.90

PSKPENTVNL

14.39

-1.74

-1.72

VPPPNVPKKD

14.85

-3.65

-3.63

P34245

GPWPGPAECL

15.56

-1.17

-1.15

Q01389

RSKPLPPQLL

12.58

-3.31

-3.29

RRYPQTPSYY

13.47

-1.15

-1.13

PASPSYPSIF

13.97

-3.34

-3.32

Q03306

KPFRIPSSTK

11.33

-3.27

-3.25

EKPFRIPSST

13.44

-1.36

-1.34

PKVPVINDNV

15.06

-0.95

-0.93

P34758

HSQPNKPNYG

13.54

-2.23

-2.21

GLQPLKPTAT

14.29

-1.89

-1.87

PLEPLKPTAT

14.54

-3.12

-3.10

P53933

VSYPGNPTSR

10.87

-2.18

-2.16

PPPPIPSTQK

12.90

-3.05

-3.03

Q00453

SDTPASPSKV

13.90

-2.67

-2.65

ISTPASPQDT

14.54

-0.82

-0.80

P40021

DFLPSTPSQM

13.52

-3.64

-3.62

VISPNLPTTI

13.77

-2.07

-2.05

ISPNLPTTIT

14.48

-2.88

-2.86

Q04439

SSKPKEPMFE

9.89

-3.64

-3.62

NNIPTPPQNR

14.73

-1.86

-1.84

PPPPGMQNKA

15.20

-3.38

-3.36

Q12446

RPLPQLPNRN

12.38

-2.83

-2.81

LPPASPEVRK

13.26

-3.29

-3.27

FPIPEIPSTQ

13.32

-2.48

-2.46

Q01560

PQEPQVPQES

14.09

-1.10

-1.08

PPPPGEHMHG

15.77

-3.31

-3.29

P33334

NAIPGGPKFE

11.48

-3.96

-3.94

MPTRFPPAVF

13.67

-2.44

-2.42

LDNPMVPSSV

15.25

-0.27

-0.25

P40523

PHGPFSTSML

12.89

-2.86

-2.84

HNSPRNPDTG

13.70

0.99

1.01

GGPLASPTHY

14.99

-3.24

-3.22

P40563

NSQPQGPSDT

13.98

-1.62

-1.60

NPGQLPPSLE

14.75

-3.34

-3.32

P53094

SAFPQSPIRA

13.33

-3.50

-3.48

LNVPLPPQTR

14.18

-2.02

-2.00

AKAPNTPSTS

14.43

-2.41

-2.39

P37370

MPKPRPFQNK

10.80

-1.83

-1.81

PPPPTLTTNK

12.16

-2.14

-2.12

QNRPHMPSVR

12.40

-2.90

-2.88

Q03900

NTPSGAPKLK

11.79

-1.44

-1.42

SHLPNTPSGA

15.32

-0.53

-0.51

 


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