ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-16.PDB
Scoring matrix: MYO5_1ZUY-16_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 14.92
Foldx random average score for Saccharomyces cerevisiae: 14.683

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1749163
Proteins after disorder filtering: 4667
 Total fragments: 108211
Proteins after pattern filtering: 2179
 Total fragments: 10856
Proteins after MINT filtering: 45
 Total fragments: 567

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

14.92

0.22

0.00

Best peptides

RFPIPSRRF

0.00

-3.63

-3.84

         
Interactors      
P53145

LPPLPGQPP

10.92

-4.05

-4.26

NEPLLPPLP

10.93

-2.94

-3.15

LLPPLPGQP

13.81

-2.17

-2.38

P39113

ASHRGPRRP

9.35

-1.50

-1.72

MSPLGAPPP

10.15

-3.25

-3.46

PRRPQKNRY

10.82

-2.11

-2.32

P40073

GYPQQQPSH

11.17

-1.84

-2.06

FDGYPQQQP

11.87

-1.54

-1.76

P25604

KPKSPHLKP

11.66

-1.61

-1.83

QAPSLPPKP

11.69

-1.09

-1.31

LPPKPKSPH

12.39

-3.48

-3.69

P25623

SSNLPKTVP

11.42

-2.13

-2.34

QTFTPSEVP

11.96

-0.48

-0.69

PLPVEPASP

13.06

-2.22

-2.44

Q05933

NFTLPGTPG

11.04

-3.30

-3.51

TKFRGPAYP

11.52

-0.91

-1.13

TFPVDPNTD

13.81

-2.49

-2.71

P53094

AFPQSPIRA

10.21

-1.76

-1.98

REPNEPPPP

12.16

-2.37

-2.59

YPLKLPPLP

12.53

-4.02

-4.23

Q12451

PHLLPWLPP

10.90

-2.21

-2.42

AAPKHAPPP

12.04

-1.72

-1.94

QPHLLPWLP

14.00

-3.28

-3.49

P15891

RRATPEKKP

8.08

-1.67

-1.89

KSFTPSKSP

8.72

-1.26

-1.48

ISPKPFSKP

9.53

-1.62

-1.84

P48562

KPPISAPRA

8.94

-3.32

-3.53

QFPRGPMHP

9.51

-2.42

-2.63

QNIGPAPRP

9.56

-0.64

-0.85

P40341

KPPLNDPSN

12.04

-5.16

-5.38

SRNIPPPPP

13.13

-2.91

-3.13

PLNDPSNPV

14.13

0.47

0.26

Q08912

YTPSWGPSP

10.47

-1.71

-1.93

VCYTPSWGP

11.15

-1.71

-1.93

DHPKGPPPP

13.12

-1.00

-1.22

P17555

RPKKPSTLK

10.71

-4.07

-4.29

SKSGPPPRP

11.74

-1.19

-1.41

PAPPASVFE

14.31

0.99

0.78

Q12342

RKAKAPPPP

10.80

-3.48

-3.69

KAKAPPPPP

14.37

-1.92

-2.13

P47068

YHPMPNTAP

7.68

-3.91

-4.13

PFVDPSSNP

10.36

-1.09

-1.31

PSSNPFFRK

10.49

-0.42

-0.64

P38822

APEVPPPRR

12.73

-2.49

-2.71

RGPAPEVPP

13.16

-0.91

-1.13

VGDTPTTTP

13.36

-0.87

-1.09

P04050

PPVRPSISF

10.31

-3.84

-4.05

NYSPTSPSY

11.41

-1.37

-1.59

GSPAYSPKQ

12.30

0.54

0.33

P40450

KLPQLPPPP

12.41

-2.19

-2.40

VSSSPKLFP

12.50

-0.11

-0.33

PPPLPDLFK

13.45

-2.57

-2.78

P40453

RLRKRPPPP

11.13

-4.41

-4.63

LRKRPPPPP

12.08

-4.04

-4.25

WKPPDLPIR

12.14

-1.19

-1.41

Q12168

KVQHPVPKP

11.81

-1.36

-1.58

NDDPYFPQF

13.58

-1.30

-1.52

PLPPRANVQ

14.55

-0.28

-0.50

P41832

LSSQPPPPP

13.54

-1.36

-1.58

PPPLPSVLS

13.75

-3.14

-3.36

KGETPPPPP

13.98

-1.86

-2.08

P36006

KSNKKPKNP

11.80

-1.85

-2.06

MGQPKDPKF

12.07

-2.39

-2.61

NIPIPPPPP

12.80

-3.85

-4.07

P38753

YSPYPSNLP

8.73

-2.23

-2.44

NLPIQHPTN

10.07

-3.38

-3.59

PSNLPIQHP

11.76

-2.00

-2.21

P38237

NFQIPSKPE

9.37

-1.49

-1.71

ENFQIPSKP

13.52

-0.12

-0.33

IPSKPENTV

14.20

-0.47

-0.68

P34245

YSTPFGPWP

11.20

-2.27

-2.48

FGPWPGPAE

11.43

0.23

0.02

AYSTPFGPW

12.01

-1.07

-1.29

Q01389

YPQTPSYYY

9.52

-3.68

-3.90

RYPQTPSYY

10.07

-4.36

-4.58

NIPSPSSSP

10.50

-0.74

-0.95

Q03306

NKSIPRTKP

7.61

-3.50

-3.71

PFRIPSSTK

8.70

-3.52

-3.73

LGTVPSTTP

9.59

-1.84

-2.06

P34758

QSIKPSSTP

8.62

-1.15

-1.37

LSSSPSPNP

9.55

-0.87

-1.09

NQQQPQHLP

9.87

-0.90

-1.12

P53933

YNDLPMELP

9.12

-4.85

-5.06

PPPIPSTQK

11.86

-3.48

-3.69

KRVAPPPLP

12.93

-1.82

-2.04

P32381

LLTEPPMNP

12.67

-1.37

-1.59

Q00453

YFPHPMPSA

9.64

-3.43

-3.65

SAPIPLPHQ

9.74

-1.37

-1.59

YAPPYFPHP

10.29

-2.22

-2.44

P40021

NYVISPNLP

10.28

-2.30

-2.51

SESHPPNHP

12.18

-0.97

-1.19

LDFLPSTPS

12.36

-3.02

-3.23

P36150

PIVVNPSSP

14.31

-2.25

-2.46

Q04439

RHSKKPAPP

11.07

-1.89

-2.11

HSKKPAPPP

11.90

-1.87

-2.09

QANIPPPPP

12.13

-3.28

-3.49

Q12446

PFPVPQQQF

9.45

-3.47

-3.69

QSQIPQSAP

10.11

-2.60

-2.81

FAPLPDPPQ

10.29

-3.19

-3.40

Q01560

QPPEPQPYY

12.12

-1.54

-1.76

HHQPPEPQP

12.46

-0.26

-0.47

PEPQPYYPP

12.86

-0.66

-0.88

P00950

RSFDVPPPP

14.38

-2.01

-2.22

P53735

PAPKLVPPP

13.41

-2.08

-2.29

PKLVPPPPR

14.22

-2.86

-3.07

LVPPPPRTR

14.58

-2.72

-2.94

P33334

LFFDPSLNP

8.86

-1.64

-1.86

NAIPGGPKF

10.70

-1.95

-2.17

NNAIPGGPK

10.79

-1.89

-2.11

P40523

YMHNSPRNP

9.21

-2.98

-3.19

GGPLASPTH

10.36

-2.73

-2.94

ENITPLPTP

11.68

-0.38

-0.59

P40563

PSERPKRRA

8.62

-1.89

-2.11

GMVNPGQLP

10.68

-1.42

-1.64

VTPKVPERP

12.45

-1.10

-1.32

Q08989

DHPKGPPPP

13.12

-1.00

-1.22

NGDHPKGPP

13.57

-0.70

-0.91

P37370

RPHMPSVRP

6.14

-4.23

-4.45

VSQMPKPRP

7.64

-3.13

-3.34

QMPKPRPFQ

9.33

-1.94

-2.15

P39743

NATIPEDNP

9.91

-2.40

-2.61

AYSNPLTSP

10.94

-1.16

-1.38

SNPLTSPVA

11.43

-1.83

-2.04

Q03900

LPNTPSGAP

11.41

-2.02

-2.23

HLPNTPSGA

14.63

-1.10

-1.32

 


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