ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-11.PDB
Scoring matrix: MYO5_1ZUY-11_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.4
Foldx random average score for Saccharomyces cerevisiae: 10.218

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1374429
Proteins after disorder filtering: 4539
 Total fragments: 66995
Proteins after pattern filtering: 2120
 Total fragments: 10511
Proteins after MINT filtering: 43
 Total fragments: 813

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

12.40

-0.60

0.00

Best peptides

RMWIPPR

0.00

-6.01

-5.41

         
Interactors      
P53145

LPPLPGQ

7.68

-4.63

-4.03

NEPLLPP

7.74

-3.93

-3.33

EPLLPPL

8.26

-4.36

-3.76

P39113

RGPRRPQ

7.06

-3.45

-2.85

GPRRPQK

7.28

-3.22

-2.62

PPPPPHK

8.03

-3.68

-3.08

P40073

PQQQPSH

8.13

-3.48

-2.88

P25604

TPPLPPK

6.36

-4.27

-3.67

APSLPPK

6.42

-5.39

-4.79

KPPLPPP

6.97

-6.57

-5.97

P25623

TPPLPPH

7.42

-3.97

-3.37

PLPVEPA

8.01

-2.83

-2.23

PKTVPIS

8.26

-3.00

-2.40

Q05933

LPGTPGF

8.06

-3.71

-3.11

RGPAYPS

8.36

-3.53

-2.93

GPAYPSN

9.46

-3.08

-2.48

P53094

REPNEPP

6.31

-4.09

-3.49

PLKLPPL

6.81

-5.48

-4.88

NVPLPPQ

7.79

-4.64

-4.04

Q12451

QPHLLPW

7.21

-3.37

-2.77

LPWLPPT

7.95

-4.98

-4.38

PKHAPPP

8.32

-3.95

-3.35

P15891

QPPLPSR

4.00

-5.07

-4.47

APPPPPR

5.97

-3.78

-3.18

PPPPPRR

6.49

-4.23

-3.63

P48562

RGPMHPN

6.80

-5.23

-4.63

PSPLNPY

7.22

-4.21

-3.61

SAPRAPY

7.29

-2.94

-2.34

P40341

RNIPPPP

6.77

-6.33

-5.73

PPPPPPK

7.57

-5.03

-4.43

NIPPPPP

7.77

-4.47

-3.87

Q08912

PKGPPPP

8.13

-4.18

-3.58

KGPPPPP

8.34

-4.50

-3.90

PPPPPPP

9.06

-4.72

-4.12

P17555

PPPRPKK

6.59

-4.64

-4.04

RPKKPST

7.22

-6.13

-5.53

PAPPPPP

8.48

-4.86

-4.26

Q12342

AKAPPPP

7.77

-3.92

-3.32

KAPPPPP

7.77

-4.86

-4.26

APPPPPP

8.88

-4.40

-3.80

P47068

TAPPLPR

6.75

-1.83

-1.23

APSIPPV

7.81

-3.71

-3.11

IPPVPPT

7.88

-4.60

-4.00

P38822

PEVPPPR

5.55

-4.51

-3.91

APEVPPP

7.93

-3.55

-2.95

PTTTPGS

10.12

-3.60

-3.00

P04050

CLPVPPP

6.57

-4.56

-3.96

VPPPPVR

6.78

-3.61

-3.01

SPTSPGY

8.34

-3.44

-2.84

P40450

SPKLFPR

5.68

-3.28

-2.68

QLPPPPP

6.96

-5.28

-4.68

KLPQLPP

7.67

-4.03

-3.43

P40453

RKRPPPP

5.56

-7.08

-6.48

PPDLPIR

5.78

-4.81

-4.21

PPPLPPK

6.19

-6.07

-5.47

Q12168

PPPLPPR

4.78

-6.42

-5.82

PPPVPNR

5.43

-4.45

-3.85

RGPPPLP

7.29

-5.85

-5.25

P41832

PPPVPAK

6.90

-4.73

-4.13

IPPAPPM

7.94

-3.91

-3.31

QPPPPPP

8.05

-5.06

-4.46

P36006

NIPIPPP

5.84

-5.11

-4.51

PIPPPPP

7.60

-4.83

-4.23

IPPPPPP

8.30

-5.32

-4.72

P38753

PVMPPQR

6.58

-3.50

-2.90

TPVMPPQ

8.21

-4.31

-3.71

SPPVPGP

8.21

-2.75

-2.15

P38237

PPNVPKK

7.47

-4.82

-4.22

DPFVPPP

8.56

-3.49

-2.89

QIPSKPE

9.04

-2.21

-1.61

P34245

FGPWPGP

8.96

-3.76

-3.16

PWPGPAE

9.83

-2.59

-1.99

YSTPFGP

9.95

-1.79

-1.19

Q01389

EPSTPSR

6.68

-3.20

-2.60

SKPLPPQ

6.79

-5.53

-4.93

REAPKPP

7.41

-4.82

-4.22

Q03306

RQPTPSP

5.73

-6.30

-5.70

PFRIPSS

7.30

-4.29

-3.69

SPPLPQM

7.61

-4.57

-3.97

P34758

QPNKPNY

6.03

-4.43

-3.83

QLPLEPL

6.09

-3.80

-3.20

PPPPPPR

6.16

-4.24

-3.64

P53933

PPPLPNR

5.30

-5.71

-5.11

RRPPPPP

5.44

-6.83

-6.23

RRRPPPP

5.69

-5.35

-4.75

P32381

EPPMNPL

9.31

-2.52

-1.92

TEPPMNP

9.78

-2.95

-2.35

Q00453

PPPLPIY

6.13

-6.03

-5.43

PIPLPHQ

7.06

-5.69

-5.09

APPYFPH

7.21

-3.09

-2.49

P40021

PLPPPAR

5.64

-4.53

-3.93

PPPLPPP

7.68

-5.63

-5.03

PLPPPLF

7.70

-4.21

-3.61

Q04439

SKPKEPM

6.82

-2.61

-2.01

KKPAPPP

7.11

-4.58

-3.98

NIPTPPQ

7.73

-4.57

-3.97

Q12446

LPQLPNR

5.50

-4.68

-4.08

APPPPPR

5.97

-3.78

-3.18

RLPAPPP

5.98

-8.17

-7.57

Q01560

PEPQPYY

5.66

-4.57

-3.97

QPYYPPP

6.81

-4.91

-4.31

PQPYYPP

7.24

-3.95

-3.35

P00950

FDVPPPP

8.96

-3.00

-2.40

DVPPPPI

9.34

-2.66

-2.06

P53735

LVPPPPR

5.18

-4.00

-3.40

PKLVPPP

6.75

-4.40

-3.80

KLVPPPP

7.77

-4.79

-4.19

P33334

PKFEPLY

6.06

-4.14

-3.54

PPPPPGY

7.04

-4.96

-4.36

MPTRFPP

7.45

-4.28

-3.68

P40523

ITPLPTP

7.64

-3.70

-3.10

PVGVPPL

7.82

-3.83

-3.23

PLAPPPH

7.94

-4.38

-3.78

P40563

PSERPKR

5.19

-4.04

-3.44

TPNVPTR

6.46

-3.04

-2.44

TPKVPER

6.66

-3.31

-2.71

Q08989

PKGPPPP

8.13

-4.18

-3.58

KGPPPPP

8.34

-4.50

-3.90

PPPPPPP

9.06

-4.72

-4.12

P37370

QMPKPRP

5.41

-5.41

-4.81

RPHMPSV

6.07

-4.25

-3.65

APPIPGM

6.49

-4.32

-3.72

Q03900

LPNTPSG

9.52

-3.12

-2.52

PSGAPKL

9.97

-1.97

-1.37

 


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