ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-10.PDB
Scoring matrix: MYO5_1ZUY-10_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.66
Foldx random average score for Saccharomyces cerevisiae: 14.879

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1919059
Proteins after disorder filtering: 4821
 Total fragments: 130542
Proteins after pattern filtering: 2309
 Total fragments: 13695
Proteins after MINT filtering: 45
 Total fragments: 867

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

12.66

2.09

0.00
Best peptides

YRRIGWMR

0.00

-4.48

-6.57
         
Interactors      
P53145

PGQPPLIN

12.17

-0.33

-2.42

PLLPPLPG

12.67

-0.84

-2.93

PPLPGQPP

13.93

-0.10

-2.19
P39113

MSPLGAPP

9.45

-2.41

-4.50

THPEGPNC

10.63

-1.56

-3.65

PRRPQKNR

11.18

1.55

-0.54
P40073

PQQQPSHT

11.22

-0.81

-2.90
P25604

PKPKSPHL

9.82

0.06

-2.03

HLKPPLPP

10.79

-0.69

-2.78

QDQAPSLP

11.66

-0.62

-2.71
P25623

PKTVPISI

11.09

-1.39

-3.48

TKPLPVEP

11.41

-1.10

-3.19

TFTPSEVP

11.73

-0.23

-2.32
Q05933

FRGPAYPS

9.52

-0.28

-2.37

FTLPGTPG

10.13

-0.97

-3.06

PGTPGFPL

10.97

-1.48

-3.57
P53094

PLKLPPLP

9.94

-2.95

-5.04

AFPQSPIR

10.10

-1.39

-3.48

LKLPPLPL

11.13

-0.39

-2.48
Q12451

PHLLPWLP

12.06

-2.24

-4.33

PKHAPPPV

12.07

-1.57

-3.66

KHAPPPVP

12.07

-2.08

-4.17
P15891

VKTPSPAP

11.03

0.12

-1.97

DEPEGEPD

11.39

-0.29

-2.38

AAPPPPPR

11.82

-1.22

-3.31
P48562

QFPRGPMH

5.34

-5.21

-7.30

NIGPAPRP

8.68

-1.85

-3.94

VQPVAPKN

9.44

-1.54

-3.63
P40341

SRNIPPPP

11.01

-2.19

-4.28

RNIPPPPP

11.67

-3.74

-5.83

NIPPPPPP

12.44

-1.93

-4.02
Q08912

CYTPSWGP

11.67

0.25

-1.84

DHPKGPPP

11.89

-2.56

-4.65

PKGPPPPP

12.06

-1.52

-3.61
P17555

PKKPSTLK

9.88

0.40

-1.69

KSGPPPRP

10.30

-2.62

-4.71

PAPPASVF

10.58

-1.15

-3.24
Q12342

KAPPPPPP

12.09

-1.79

-3.88

LETPSTPS

12.18

0.83

-1.26

AKAPPPPP

12.20

-1.10

-3.19
P47068

YVPPGIPT

8.15

-2.22

-4.31

YYVPPGIP

8.46

-3.24

-5.33

PAPPAPLA

9.70

-0.71

-2.80
P38822

PEVPPPRR

7.97

-2.04

-4.13

RGPAPEVP

12.81

-3.17

-5.26
P04050

VSSPGFSP

9.39

-1.96

-4.05

PTSPGFGV

9.88

-1.23

-3.32

PVPPPPVR

9.93

-1.61

-3.70
P40450

PKLFPRLS

10.62

-1.20

-3.29

IAAPAPPP

11.25

-0.76

-2.85

QLPPPPPP

11.31

-1.98

-4.07
P40453

PEIPPPLP

9.70

-1.23

-3.32

LRKRPPPP

10.37

-3.04

-5.13

RKRPPPPP

10.44

-2.74

-4.83
Q12168

PNRPGGTT

9.20

-1.66

-3.75

NRGPPPLP

9.98

-1.71

-3.80

PLPPRANV

11.95

1.15

-0.94
P41832

VIPPAPPM

10.44

-1.44

-3.53

GDSPAPPP

12.24

-1.93

-4.02

DGVIPPAP

12.24

-0.20

-2.29
P36006

PKNPGGLS

7.26

-2.09

-4.18

NIPIPPPP

11.23

-2.02

-4.11

TANIPIPP

11.87

-0.47

-2.56
P38753

PVMPPQRQ

11.84

-2.49

-4.58

HISPPVPG

11.86

-0.62

-2.71

ANNTPVMP

11.99

-1.54

-3.63
P38237

NFQIPSKP

10.23

-2.17

-4.26

PFVPPPNV

10.83

-1.82

-3.91

FVPPPNVP

11.10

-1.79

-3.88
P34245

STPFGPWP

8.14

-1.68

-3.77

GPWPGPAE

12.92

-2.18

-4.27

PWPGPAEC

13.27

0.92

-1.17
Q01389

PSYPSIFR

10.11

0.46

-1.63

PKPPANTS

10.65

0.20

-1.89

KRSKPLPP

10.76

-3.04

-5.13
Q03306

PFRIPSST

10.78

-1.60

-3.69

PRTKPNVP

11.13

-3.25

-5.34

PSSPPPIS

11.64

-1.33

-3.42
P34758

QLPLEPLK

10.71

0.89

-1.20

HLPPPPPP

10.98

-2.28

-4.37

QQQPQHLP

12.02

2.14

0.05
P53933

RVAPPPLP

9.89

-4.00

-6.09

RRRPPPPP

10.41

-3.57

-5.66

RRPPPPPI

11.01

-3.89

-5.98
P32381

LTEPPMNP

11.54

-0.23

-2.32
Q00453

PMPSAPIP

9.47

-1.33

-3.42

LYAPPYFP

9.56

-1.44

-3.53

YFPHPMPS

11.24

-1.47

-3.56
P40021

PLPPPLFP

10.25

-1.93

-4.02

YVISPNLP

10.43

-2.52

-4.61

PLPPPARS

10.60

-2.54

-4.63
P36150

IVVNPSSP

12.88

0.25

-1.84

VVNPSSPS

13.83

1.24

-0.85
Q04439

SKKPAPPP

10.24

-0.40

-2.49

SKPKEPMF

11.02

1.65

-0.44

QANIPPPP

11.18

-1.91

-4.00
Q12446

RRGPAPPP

9.37

-2.81

-4.90

PFPIPEIP

9.56

-3.94

-6.03

VRLPAPPP

9.81

-0.70

-2.79
Q01560

QEPPAPQE

8.65

-1.03

-3.12

QAPDAPQE

10.84

-0.16

-2.25

PPPPGEHM

10.97

-0.46

-2.55
P00950

DVPPPPID

11.75

-0.60

-2.69

FDVPPPPI

12.26

-1.62

-3.71

SFDVPPPP

12.80

-1.45

-3.54
P53735

KLVPPPPR

9.28

-3.19

-5.28

LVPPPPRT

9.90

-2.86

-4.95

PKLVPPPP

11.83

-2.30

-4.39
P33334

AIPGGPKF

9.26

-2.98

-5.07

NAIPGGPK

9.91

-1.23

-3.32

FFDPSLNP

10.63

-1.22

-3.31
P40523

GAPPGTVP

9.46

-2.91

-5.00

PLAPPPHG

9.95

-1.38

-3.47

PVPVGVPP

10.27

-2.84

-4.93
P40563

MVNPGQLP

7.06

-3.38

-5.47

RRAPPPVP

9.54

-4.71

-6.80

PSERPKRR

10.04

-2.68

-4.77
Q08989

DHPKGPPP

11.89

-2.56

-4.65

PKGPPPPP

12.06

-1.52

-3.61

KGPPPPPP

12.76

-1.89

-3.98
P37370

SIPLAPLP

8.89

-2.12

-4.21

PALPGHVP

9.18

-1.99

-4.08

PLSPAPAV

9.24

-0.60

-2.69
P39743

YSNPLTSP

14.39

1.68

-0.41
Q03900

NTPSGAPK

11.59

0.59

-1.50

PSGAPKLK

12.57

-1.71

-3.80

PNTPSGAP

12.68

0.31

-1.78

 


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