ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1YP5-9.PDB
Scoring matrix: MYO5_1YP5-9_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.55
Foldx random average score for Saccharomyces cerevisiae: 10.143

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1666709
Proteins after disorder filtering: 4429
 Total fragments: 57182
Proteins after pattern filtering: 2077
 Total fragments: 8811
Proteins after MINT filtering: 41
 Total fragments: 519

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

12.55

1.06

0.00

Best peptides

KRPRPPRK

0.00

-5.65

-6.71

         
Interactors      
P53145

LPGQPPLI

5.98

-2.50

-3.56

LLPPLPGQ

7.23

-3.79

-4.85

NEPLLPPL

8.49

-5.40

-6.46

P39113

RGPRRPQK

5.09

-4.71

-5.77

GPRRPQKN

6.02

-2.39

-3.45

APPPPPHK

7.55

-0.60

-1.66

P40073

PQQQPSHT

9.63

-2.08

-3.14

YPQQQPSH

9.85

-1.60

-2.66

P25604

KPKSPHLK

5.60

-1.50

-2.56

LPPKPNTQ

5.70

-2.27

-3.33

LPPPPPPQ

6.79

-3.63

-4.69

P25623

PPLQPQSK

7.73

-1.79

-2.85

TPPLPPHA

8.18

-1.19

-2.25

PKTVPISI

8.34

-3.48

-4.54

Q05933

FPVDPNTD

9.13

-1.26

-2.32

RGPAYPSN

9.24

-1.07

-2.13

TPGFPLNN

9.84

0.47

-0.59

P53094

YPLKLPPL

6.12

-4.25

-5.31

KLPPLPLT

6.32

-3.45

-4.51

FPQSPIRA

6.69

-1.27

-2.33

Q12451

LPWLPPTD

6.88

-3.86

-4.92

QPHLLPWL

7.17

-3.60

-4.66

LLPWLPPT

7.20

-3.24

-4.30

P15891

QPPLPSRN

5.47

-4.60

-5.66

KPEVPEDE

6.57

-1.75

-2.81

APPPPPRR

7.22

-2.38

-3.44

P48562

KPPISAPR

6.72

-2.08

-3.14

NPYRPHHN

6.98

-1.64

-2.70

VQPVAPKN

7.08

-3.45

-4.51

P40341

PPPKPPLN

5.27

-4.10

-5.16

PPPPPPPK

7.72

-2.66

-3.72

KPPLNDPS

8.27

-0.33

-1.39

Q08912

PPPPPDEK

8.02

-2.49

-3.55

PPPPPPPD

9.32

-2.50

-3.56

PPPPPPDE

9.98

-2.76

-3.82

P17555

RPKKPSTL

5.70

-3.01

-4.07

PRPKKPST

7.55

-3.86

-4.92

GPPPRPKK

7.98

-1.14

-2.20

P47068

PPHVPSLT

8.01

-2.71

-3.77

VPPVPPVS

8.09

-2.42

-3.48

APPVPPAT

8.15

-1.39

-2.45

P38822

APEVPPPR

7.78

-3.27

-4.33

PEVPPPRR

7.88

-4.67

-5.73

P04050

PPVRPSIS

7.95

-3.33

-4.39

LPVPPPPV

8.13

-1.73

-2.79

PPPVRPSI

8.70

-0.75

-1.81

P40450

PPPLPDLF

6.57

-4.79

-5.85

SPKLFPRL

7.66

-1.63

-2.69

PPPLPESL

8.12

-2.86

-3.92

P40453

PPPLPPKI

6.27

-4.91

-5.97

PPDLPIRL

6.70

-4.51

-5.57

KVPEPPSW

6.95

-3.51

-4.57

Q12168

PPPLPPRA

5.84

-5.82

-6.88

VPNRPGGT

7.80

-1.28

-2.34

PVPKPNID

8.09

-3.80

-4.86

P41832

PPPVPAKL

6.22

-3.57

-4.63

IPPAPPMM

7.06

-2.37

-3.43

PPPPPPMA

8.01

-3.24

-4.30

P36006

KPKNPGGL

6.98

-0.70

-1.76

GQPKDPKF

7.43

-3.61

-4.67

KKPKNPGG

7.50

-3.70

-4.76

P38753

TPVMPPQR

7.54

-2.84

-3.90

YPSNLPIQ

7.56

-2.23

-3.29

PVMPPQRQ

7.88

-4.10

-5.16

P38237

DPFVPPPN

7.15

-2.39

-3.45

PPNVPKKD

7.47

-3.30

-4.36

IPSKPENT

7.49

-0.57

-1.63

P34245

FGPWPGPA

7.97

-2.66

-3.72

YSTPFGPW

10.13

-2.01

-3.07

Q01389

KPLPPQLL

6.26

-1.45

-2.51

EAPKPPAN

7.12

-3.32

-4.38

APTKPNPQ

7.18

-2.61

-3.67

Q03306

KPNVPPLQ

4.01

-3.47

-4.53

KPFRIPSS

6.44

-1.11

-2.17

PFRIPSST

7.73

-3.43

-4.49

P34758

QLPLEPLK

6.51

-5.27

-6.33

PPPPPPRA

7.17

-3.88

-4.94

LQPLKPTA

7.41

-5.43

-6.49

P53933

RRPPPPPI

5.67

-5.17

-6.23

PPPLPNRQ

5.97

-6.15

-7.21

PPPIPSTQ

6.78

-3.05

-4.11

Q00453

LPHQPPPL

6.75

-3.04

-4.10

YFPHPMPS

7.75

-3.90

-4.96

SAPIPLPH

7.91

-3.86

-4.92

P40021

LPSTPSQM

7.37

-3.21

-4.27

PPPLPPPL

7.50

-4.18

-5.24

PLPPPARS

7.67

-5.15

-6.21

Q04439

KPKEPMFE

6.02

-1.02

-2.08

APPPPGMQ

7.51

-1.55

-2.61

NIPTPPQN

7.55

-4.67

-5.73

Q12446

LPQLPNRN

5.36

-4.85

-5.91

IPEIPSTQ

6.26

-2.26

-3.32

LPPLPNQF

6.37

-5.15

-6.21

Q01560

YPPPPPGE

8.25

-3.72

-4.78

YYPPPPPG

8.50

-5.57

-6.63

QPPEPQPY

8.57

0.14

-0.92

P00950

FDVPPPPI

7.68

-3.04

-4.10

DVPPPPID

9.88

-2.38

-3.44

VPPPPIDA

10.06

-1.15

-2.21

P53735

LVPPPPRT

6.41

-4.73

-5.79

KLVPPPPR

6.71

-4.45

-5.51

VPPPPRTR

9.76

-0.79

-1.85

P33334

MPTRFPPA

6.47

-2.99

-4.05

LPPPPPGF

7.43

-1.85

-2.91

PPPPPGFE

8.34

-2.73

-3.79

P40523

PVGVPPLA

7.35

-4.83

-5.89

PGTVPNMQ

8.26

-3.82

-4.88

PLPTPVPV

8.64

-3.75

-4.81

P40563

PSERPKRR

6.53

-4.35

-5.41

RAPPPVPK

6.64

-4.18

-5.24

APPPVPKK

7.93

-1.53

-2.59

Q08989

PPPPPDEK

8.02

-2.49

-3.55

PPPPPPPD

9.32

-2.50

-3.56

PPPPPPDE

9.98

-2.76

-3.82

P37370

QMPKPRPF

5.78

-5.27

-6.33

PKPRPFQN

5.86

-5.06

-6.12

RPHMPSVR

6.13

-2.42

-3.48

Q03900

LPNTPSGA

8.12

-2.70

-3.76

PSGAPKLK

8.81

-2.68

-3.74

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER