ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1YP5-21.PDB
Scoring matrix: MYO5_1YP5-21_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 15.23
Foldx random average score for Saccharomyces cerevisiae: 13.873

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1942208
Proteins after disorder filtering: 4472
 Total fragments: 79803
Proteins after pattern filtering: 1699
 Total fragments: 4209
Proteins after MINT filtering: 36
 Total fragments: 182

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

15.23

1.37

0.00

Best peptides

EMKIGRPTMT

0.00

0.11

-1.26

         
Interactors      
P39113

HRGPRRPQKN

8.71

-2.09

-3.46

PEGPNCTNTN

10.98

-2.11

-3.48

FTHPEGPNCT

11.01

-0.85

-2.22

P40073

GYPQQQPSHT

12.14

-1.09

-2.46

P25604

PPKPKSPHLK

8.97

-3.65

-5.02

PPQPASNALD

12.13

-2.92

-4.29

P25623

QPPLQPQSKT

11.16

-4.55

-5.92

SQPPLQPQSK

12.92

-1.31

-2.68

EVPPSTPQQS

12.97

-1.26

-2.63

Q05933

STFPVDPNTD

11.57

-0.65

-2.02

TFPVDPNTDR

12.82

-1.57

-2.94

FRGPAYPSNS

13.01

-0.01

-1.38

Q12451

PPVPNETDND

13.54

0.35

-1.02

P15891

DEPEGEPDVK

11.08

-0.58

-1.95

TPSPAPAAKI

12.87

-1.90

-3.27

PPLPSRNVAS

13.10

-1.46

-2.83

P48562

PYRPHHNMIN

9.99

-1.96

-3.33

RQAPKRPDAD

10.44

0.79

-0.58

PRGPMHPNNS

12.32

-1.61

-2.98

P40341

LNDPSNPVSK

12.38

-1.28

-2.65

Q08912

PPPPDEKDRG

13.20

-2.55

-3.92

P17555

PRPKKPSTLK

9.62

-1.18

-2.55

PKKPSTLKTK

10.35

-1.64

-3.01

PPRPKKPSTL

11.32

-1.32

-2.69

Q12342

LETPSTPSDG

13.07

0.66

-0.71

P47068

PEPISPETKK

8.61

-3.73

-5.10

YVPPGIPTND

11.69

-0.47

-1.84

LPEPISPETK

12.18

-0.76

-2.13

P04050

GFSPTSPTYS

9.81

-0.42

-1.79

SYSPTSPNYS

10.88

-1.76

-3.13

GYSPGSPAYS

10.93

-0.86

-2.23

P40450

SSPKLFPRLS

10.58

-1.84

-3.21

PPLPDLFKTK

11.46

-1.32

-2.69

PPLPESLSMN

11.65

-2.52

-3.89

P40453

PDLPIRLRKR

9.67

-2.54

-3.91

WKPPDLPIRL

11.92

-0.52

-1.89

TKVPEPPSWK

12.02

-1.34

-2.71

Q12168

NDDPYFPQFR

9.64

-0.93

-2.30

PNRPGGTTNR

9.87

-1.63

-3.00

PPVPNRPGGT

12.22

-0.48

-1.85

P36006

MGQPKDPKFE

10.89

-2.14

-3.51

NKKPKNPGGL

12.01

-0.63

-2.00

PKNPGGLSGK

13.09

0.23

-1.14

P38753

NLPIQHPTNS

11.19

-2.41

-3.78

NTPVMPPQRQ

11.68

-1.78

-3.15

LPIQHPTNSA

11.76

-1.73

-3.10

P38237

FQIPSKPENT

11.47

0.91

-0.46

PSKPENTVNL

12.14

-0.25

-1.62

VPPPNVPKKD

12.36

-3.00

-4.37

P34245

GPWPGPAECL

12.55

-0.66

-2.03

Q01389

RSKPLPPQLL

8.32

-2.42

-3.79

RRYPQTPSYY

10.44

0.46

-0.91

REAPKPPANT

11.13

-1.57

-2.94

Q03306

EKPFRIPSST

11.81

-0.19

-1.56

KPFRIPSSTK

12.53

-1.00

-2.37

PFRIPSSTKD

12.60

-2.07

-3.44

P34758

HSQPNKPNYG

11.02

-0.91

-2.28

GLQPLKPTAT

11.60

-1.41

-2.78

PLEPLKPTAT

11.85

-1.22

-2.59

P53933

VSYPGNPTSR

9.81

-0.24

-1.61

Q00453

SDTPASPSKV

11.63

-1.65

-3.02

ISTPASPQDT

12.06

-0.28

-1.65

PASPQDTISL

13.53

-0.49

-1.86

P40021

VISPNLPTTI

11.05

-0.57

-1.94

DFLPSTPSQM

11.62

-1.67

-3.04

PSTPSQMNYD

11.95

-1.10

-2.47

Q04439

SSKPKEPMFE

9.45

-1.60

-2.97

PPPPGMQNKA

11.33

-3.69

-5.06

NNIPTPPQNR

11.96

-2.01

-3.38

Q12446

RPLPQLPNRN

8.26

-2.35

-3.72

FPIPEIPSTQ

10.86

-0.98

-2.35

PPPPMRTTTE

11.39

-2.94

-4.31

Q01560

PQEPQVPQES

10.80

-0.15

-1.52

PPAPQEQNDV

12.65

-1.56

-2.93

PPPPGEHMHG

13.25

-2.92

-4.29

P33334

NAIPGGPKFE

10.24

-1.96

-3.33

MPTRFPPAVF

12.01

-2.21

-3.58

PMVPSSVNED

12.49

-0.38

-1.75

P40523

HNSPRNPDTG

11.08

0.60

-0.77

PHGPFSTSML

11.27

-0.87

-2.24

GGPLASPTHY

12.05

-2.95

-4.32

P40563

NSQPQGPSDT

12.18

0.24

-1.13

NPGQLPPSLE

12.70

-1.80

-3.17

P53094

LNVPLPPQTR

10.90

-1.47

-2.84

SAFPQSPIRA

11.20

-1.97

-3.34

PPCPAMSTGS

12.81

-1.06

-2.43

P37370

QNRPHMPSVR

10.35

-1.36

-2.73

KATPVPPTLA

10.73

-2.37

-3.74

SPSINPPKQS

10.90

-3.22

-4.59

Q03900

NTPSGAPKLK

12.03

-0.47

-1.84

 


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