ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1YP5-16.PDB
Scoring matrix: MYO5_1YP5-16_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.1
Foldx random average score for Saccharomyces cerevisiae: 15.259

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1822664
Proteins after disorder filtering: 4706
 Total fragments: 125292
Proteins after pattern filtering: 2279
 Total fragments: 14666
Proteins after MINT filtering: 45
 Total fragments: 871

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

15.10

3.01

0.00
Best peptides

YPPIPSRHP

0.00

-2.66

-5.67
         
Interactors      
P53145

LPPLPGQPP

6.25

-4.42

-7.43

NEPLLPPLP

9.09

-2.52

-5.53

LPGQPPLIN

13.26

-1.74

-4.75
P39113

ASHRGPRRP

10.01

-0.28

-3.29

MSPLGAPPP

10.30

-2.56

-5.57

GPRRPQKNR

11.14

-1.43

-4.44
P40073

FDGYPQQQP

10.58

-0.08

-3.09

YPQQQPSHT

14.73

2.57

-0.44
P25604

KPKSPHLKP

8.33

-1.98

-4.99

SPHLKPPLP

9.83

-3.36

-6.37

KPPLPPPPP

9.84

-5.18

-8.19
P25623

LPPHATPKN

10.20

-1.99

-5.00

SSNLPKTVP

11.27

-1.20

-4.21

QPPLQPQSK

11.59

-1.08

-4.09
Q05933

FPVDPNTDR

9.27

0.41

-2.60

NFTLPGTPG

10.68

-2.67

-5.68

TKFRGPAYP

10.96

-1.33

-4.34
P53094

YPLKLPPLP

8.07

-3.91

-6.92

LPPLPLTSD

9.67

-4.95

-7.96

NVPLPPQTR

10.32

-1.23

-4.24
Q12451

QPHLLPWLP

9.50

-3.03

-6.04

PHLLPWLPP

10.84

-2.11

-5.12

AAPKHAPPP

12.04

-1.58

-4.59
P15891

QPPLPSRNV

6.94

-2.07

-5.08

RRATPEKKP

7.84

-1.45

-4.46

KSFTPSKSP

9.07

0.59

-2.42
P48562

KPPISAPRA

6.42

-2.93

-5.94

NPYRPHHNM

6.77

-2.34

-5.35

HHQGPSPSP

9.70

0.07

-2.94
P40341

KPPLNDPSN

8.50

-5.16

-8.17

PPKPPLNDP

12.30

-0.57

-3.58

SRNIPPPPP

12.37

-2.61

-5.62
Q08912

YTPSWGPSP

9.52

0.25

-2.76

VCYTPSWGP

10.07

-0.42

-3.43

THGDHPKGP

13.09

-0.40

-3.41
P17555

RPKKPSTLK

7.75

-2.84

-5.85

SKSGPPPRP

13.45

-0.13

-3.14

PPPRPKKPS

13.47

-1.86

-4.87
Q12342

RKAKAPPPP

11.20

-4.43

-7.44

TPSTPSDGG

11.96

-1.63

-4.64

KAKAPPPPP

15.07

-1.43

-4.44
P47068

YHPMPNTAP

7.87

-2.84

-5.85

PFVDPSSNP

9.65

-0.31

-3.32

APPLPRAPP

10.06

-3.55

-6.56
P38822

APEVPPPRR

10.82

-0.68

-3.69

VGDTPTTTP

13.11

0.48

-2.53

RGPAPEVPP

13.46

0.33

-2.68
P04050

SPTSPSYSP

9.48

-0.33

-3.34

SPTSPGYSP

9.61

-0.49

-3.50

SPTSPAYSP

10.77

-0.60

-3.61
P40450

LPQLPPPPP

9.82

-5.18

-8.19

PPPLPDLFK

9.91

0.05

-2.96

PPPLPESLS

10.86

-2.81

-5.82
P40453

TPEIPPPLP

8.81

-3.84

-6.85

PPDLPIRLR

8.89

-1.89

-4.90

MPTTPEIPP

8.95

-2.36

-5.37
Q12168

KVQHPVPKP

10.58

-0.82

-3.83

PPPLPPRAN

10.92

-3.51

-6.52

PPPVPNRPG

11.91

-2.97

-5.98
P41832

PPPLPSVLS

9.56

-2.60

-5.61

IPPAPPMMP

11.97

-1.06

-4.07

LSSQPPPPP

13.54

-0.98

-3.99
P36006

NIPIPPPPP

10.40

-3.25

-6.26

PPPMGQPKD

11.12

-3.43

-6.44

KPKNPGGLS

11.87

-1.13

-4.14
P38753

YSPYPSNLP

8.11

-0.39

-3.40

NLPIQHPTN

8.36

-2.75

-5.76

PSNLPIQHP

10.42

-2.69

-5.70
P38237

NFQIPSKPE

10.28

0.51

-2.50

IPSKPENTV

10.84

-0.64

-3.65

DLNDPFVPP

12.80

0.44

-2.57
P34245

YSTPFGPWP

10.02

0.94

-2.07

TPFGPWPGP

12.11

-0.89

-3.90

FGPWPGPAE

13.14

2.52

-0.49
Q01389

SPSYPSIFR

8.78

0.96

-2.05

NIPSPSSSP

8.79

-0.16

-3.17

YPQTPSYYY

10.45

4.20

1.19
Q03306

NKSIPRTKP

6.29

-2.36

-5.37

LGTVPSTTP

9.08

-1.35

-4.36

GEEKPFRIP

9.17

-1.72

-4.73
P34758

NQQQPQHLP

8.05

0.01

-3.00

QSIKPSSTP

9.49

-0.47

-3.48

QPNKPNYGM

9.51

-2.26

-5.27
P53933

YNDLPMELP

7.77

-2.20

-5.21

PPPIPSTQK

8.91

1.04

-1.97

PPIPSTQKP

12.10

-1.02

-4.03
P32381

LLTEPPMNP

11.79

-0.43

-3.44
Q00453

LPHQPPPLP

9.46

-2.61

-5.62

YAPPYFPHP

9.61

-0.52

-3.53

PPYFPHPMP

9.65

-1.98

-4.99
P40021

LPSTPSQMN

7.54

-2.52

-5.53

NYVISPNLP

8.32

-1.81

-4.82

FLPSTPSQM

11.52

-0.51

-3.52
P36150

PIVVNPSSP

13.02

-1.38

-4.39
Q04439

PPPPPSSKP

10.05

-1.70

-4.71

HSKKPAPPP

11.16

-1.25

-4.26

RHSKKPAPP

11.45

-2.01

-5.02
Q12446

LPQLPNRNN

6.81

-5.76

-8.77

LPPLPNQFA

6.90

-3.99

-7.00

PPPRRGPAP

8.85

-2.63

-5.64
Q01560

PPPPPGEHM

10.01

-0.47

-3.48

EPQVPQESA

11.57

-2.09

-5.10

HHQPPEPQP

11.60

0.68

-2.33
P00950

RSFDVPPPP

13.61

-1.40

-4.41
P53735

PPPPRTRSP

11.19

-1.78

-4.79

APKLVPPPP

12.12

-4.04

-7.05

LVPPPPRTR

12.50

-1.37

-4.38
P33334

LFFDPSLNP

7.65

-0.47

-3.48

NPMVPSSVN

9.56

-1.00

-4.01

NNAIPGGPK

10.88

2.11

-0.90
P40523

YMHNSPRNP

10.11

-0.88

-3.89

ENITPLPTP

11.19

0.65

-2.36

ITPLPTPVP

11.53

-1.48

-4.49
P40563

EPPTPAGTP

9.66

-1.42

-4.43

PSERPKRRA

9.71

-0.48

-3.49

GMVNPGQLP

11.02

-0.83

-3.84
Q08989

NGDHPKGPP

13.25

0.68

-2.33

DHPKGPPPP

13.35

-1.07

-4.08

PPPPDEKGR

14.05

0.10

-2.91
P37370

RPHMPSVRP

4.22

-5.63

-8.64

APALPGHVP

6.68

-3.66

-6.67

APPIPGAVP

7.18

-2.87

-5.88
P39743

NATIPEDNP

8.59

-0.75

-3.76

SNPLTSPVA

11.34

-0.50

-3.51

AYSNPLTSP

12.67

-0.17

-3.18
Q03900

LPNTPSGAP

7.97

-2.29

-5.30

PSGAPKLKN

14.96

1.71

-1.30

HLPNTPSGA

15.14

-0.39

-3.40

 


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